Id Trinity | FTRINITY_DN56132_c0_g1_i31 |
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Name Transcript | Ll_transcript_225453 |
Sequence | GACAGTTATACCCCAGGTCTCTTCTGTTATGATAAACTCAATTTTAAGGGCCCTCTTTTTAATTTGTTTTCTTAAAGTGATTGGTTATTTTGATTACAAA AATCACTTGACACTGGAACATTTTTTTTGGTTGGGCTTTTACAATAACGTGGAAGCTGCCAAAAAAGCTAATATTCAGCCTTATTTTAGAGAAGCTAAAA TTTTCAGCTTCTCAAAAGATCACTTTTATAGAATCATTAAGCCGGAAGAAAGAGGCCCTAAGTCTAGCACAGCCCAATTAATTGGATTTATATGTCATAT GCTTGAAGTGTTATATTTCTAATGTATAATTATGCATTTGGACTCATTTCTCTTCTCAATAAAAACAAATTTATTTGCTTTATGGGAATGAAAAGCATGC CTTCTTGTTTATATTGTAATGTAGCATTGAATTTTGGCAATTTTAAACAGATAACAGGAATCCCAGTGGTATTTACTTCAGCATTGGAGGGAAGGGGTCG AACTGCTGTCCTGAACCAGGTCGTTGATACATATGAAAAATGGTGTACAAGATTACCTACTTCTCGTCTTAACCGATGGTTGAAGAAGGTTATGAGCAGG CATTCTTGGAAAGACCTGGCGGCGCAGCCGAAGATCAAGTACTTTACTCAGGTCAAGGCCCGGCCGCCGACATTTGTTGCATTTATGAGTGGAAAGACTC AGCTTTCTGATACTGACATTAGGTTCTTAACAAAATCCTTGAAGGATGATTTTGATTTGGGTGGAATTCCTATAAGGATCATGCAACGTTCTATCACTAA GAAAGAAGCAAGAAGCAGTAGTAGCAAGAGTAACCATTCGGTTTCAGCAAGTAGAGTGGCTGAAAGGGTCATGTCTGACAAGAGAAAAGTCATAGTTGAA TGACAACATTATGAAGATGTAGCAGACCAGGATTTGGGAATTAGTTAGATGCTTACTGCAATTTATTTTTAAGTTTATTATCACGTCAAACGGTAAGGTT GTTTA BLAST |
Tissue | flowers |
Gene name | LI_gene_57581; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_225453
Blastp | GTPase Der from Magnetospirillum with 42.5% of identity |
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Blastx | GTPase Der from Magnetospirillum with 42.5% of identity |
Eggnog | GTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity)(COG1160) |
Kegg | Link to kegg annotations (amb1344) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020230762.1) |
Pfam | KH-domain-like of EngA bacterial GTPase enzymes, C-terminal (PF14714.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |