Ll_transcript_225462

• Id Trinity: FTRINITY_DN56132_c0_g1_i38
• Name Transcript: Ll_transcript_225462
• Sequence: AAAGAAAATCAAAGTCAAATTAAGTATATTGAAATATATGCAAATCTAACATATCCAGAGAACATGGACTATTTTGGATTTAGATTTATTTATTCTCTTC AAAAAAGAAAGAAAGAAAAGGTTTGAATTAGGAAAATGCTGTGAACATCAAAACTTTCCTGTTAAGAAAATTACTACTATATATGGAGGGACCCACCCAC TCACCCATGTCCATGTTGATGTTGTATGGTTCTAGAAGGTACTGTTCCGTTGGTATTTAAAAGCAAGTTTAGCACAAGTAGAAAGAATGAGTGAATTAGA TGGGTACTATTAGTATTATCAAGTTTTGTCTTAACCTCTTCTTTTTCCTTCTACTTTCTCTATCCTATTCTACTTCCTCTTCCTTTGCTGAGGTTTTCTT TGAAGAGAATTTCCAAGATGGGTGGAAAAGCCGTTGGGTTTTGTCTGATTGGAAAAGGAGTGAAGGAAAAGCTGGTACCTTTAAGTACACTGCTGGAAAA TGGCCTGGAGATCCTGATGATAAAGGTATTCAGACATATAATGATGCTAAACATTATGCTATATCTGCTAAGATACCAGAGTTAAGCAATAAGAATAGAA CTCTGGTGGTTCAGTATTCTATTAAATTTGAGCAGGACATTGAATGTGGTGGTGGTTATATTAAACTCCTTTCTGGTTATGTTAATCAGAAGAAATTTGG TGGTGATACTCCTTATAGTTTGATGTTCGGACCAGACTTATGTCGCTCACAGACCAAGAAGCTACATGTTATACTATCATACCAGGGGCAGAATTACCCT ATTAGAAAGGATCTACAATGTGAAACAGACAAATTGACTCATTTCTATACATTTATTCTGAGGCCTGATGCCACTTATAGTGTCCCTGTCGATAATCGAG AAAGAGATTCTGGAAGCATGTACATAGATTGGGATATCCTTCCTCCAAAGAAAATCAAGGATGTCAATGCAAAAAAGCCAATAGACTGGGATGATAGAGA GTACATTGAAGACCCTAACGATGCCAAACCAGAGGGATATGATTCGATTCCGGCTGAAATTCCTGATCCAAAAGTCAAGGAGGTTTATGTGTTTACTACA CATTTAGAATTTAAAAGATGTCAATAAATATGTTGTGGATAGTAAGCCACTACTTTTTATGCAAGACTTAATTTCGATGGGGGCTTATGAATGTTCTTTT TTCTTCAAATTTTTGTTTTAGTAGCCTGTGGACTGGGATGAAGAAGAAGATGGACTTGAAAGCCCCCGAAAATTCCTAATCCAGCATACCAAGGACCACG GAAGCGCAAGAAAATCAAGAATCTCAACTACAAAGGAAAGTGGAAGATTCCATGGATCGACAACCCAGAATTTGAGGATGACCCTGATCTTTATATGCTG AAACCAATAAAGTATGTGGGCATTGAAGTGTGGCAGGTGAAAGCTGGTTCAATTTTCGACAATATCTTAACTTGTGATAGCAAGGCAAGTTGTGGAAGAA TTTTTGTCTGATAACAGAGAGGAAGCACAGAGAGCTAGAGAAGAGGGTGAAAATAGGAGGAGAGAGAGGGATCATAAATATGGAGATAGGAAGAGGGATG AACTTTGAAATGTGCAGTGTCATTGTGGGTAGTTGTCCGAAGTGTGATTTGAAGCAATGTTGAATTGAATTGAATTGAATGCCATGTTTGAAGATATTTG AGTGTAGGACCAAAGGTGCAATTGCACTGTCCATGCCAAGCTGTATTAAACTGTATCATCTCACTAGATATGGGCACTACCCATTATGTTCATTTATTTT TCCATGGAATTAAAACTCACTACATTCAGATCCAAACATTTTCTGCCGGGGCGTTGGTTCAAGTGGTGCATGCTTGATTCTTCTTAAGCAAGGTCTCAGT TCGATTCTTGTGGATGAAAAAAATATCCGCTGGGAGAGTTAGCCCCACATATGGATGTTCCCGGCTATGACAAGATCGCCTCCAATGCGAGGACATCTGT GGGAAACAAAAAAAAACTCATGAAACTTACCTGGGGTTACTTTTGTCTCTGCATTTGTTACGAGCTTCTTGAATTCTTGATTGTTCCATTTGTTCCAGCT ATTTGAATAATTAAAGTATGAACAAGTCTTTTGTGAATCAAAGTGTTCTTGTAAGTTCTTCTGCAGAACAAATACGACAGAATAAACAGGTGAACAGGAG CACATGTCTCGCTTATTGCCTTTGTTGAGGAGGCAGAGTCTTAATAATTTCCAGCGAAAGCGAATCAGTTGTAGCTTGATCCCCAATCCTGTCCACTTCC ACACATTTATATTGCCTTTATTGGGACCAAGGTCCGTTTCTCCTTCATGCGAATTGGATGTAAGGGGTTTTTGTACTGTAACTGCAACACTTGGTGCAAG CCCTCTAGACGATGCTGGTGATGATATCGTTTTACAGGATACTAAGAAAACCTATGAAAAGCCTATTGATTTTACTCAAATTCAGATTACTCGCCTCCCC ACTGTCATCATTCTAGGCCGACCTAACGTAGGCAAGTCTGCTTTGTTTAATCGTTTAATTCGGAGGAGGGAGGCTCTGGTGTATAACACCCCACAAGATC ATGTCACCCGCGACATTCGAGAAGGAATTGCCAAGTTGGGTGATTTACGATTCAAAGTGTTGGACTCTGCTGGTTTGGAAGCAGAAGCGACTTCTGGCTC TATCCTCCACCGAACAGCTTCTATGACAGCTCATGTGTTAGCAGCATCTAACTTTGCACTCTTCCTCACTGATGCAAGAGCTGGACTCCATCCTCTTGAT TTGGAAGTCGGAAAATGGCTGCGCAAACATGCACCTCAAATCAAACCTATTGTCGTGATCAATAAATCTGAATCGCTGTTTGATGCTAGCGGCTCTCTCG CGTCAGCTGCTAATGAAGTATGCCGGTTAGGATTTGGGGATCCTATTGCTATATCTGCTGAGACGGGACTTGGAATGCATGAATTATATCTGTCTCTTAG ACCTGTGCTGGAGGACTATATGCTTCATGTCTTGAATAATGAAGTTGCTCAGGATAATAGCTACAGTGAGGACAGTAGCTCCCCCGAGGTTGACACCAGT AAGCTCCCGATGCAGTTAGCAATTGTAGGACGACCTAATGTTGGGAAATCAACCTTACTGAATTCATTGTTAAAAGAAGACCGTGTTCTTGTGGGTCCTG AAGCGGGTCTGACAAGAGATTCAATCAGAACCCAGTTTGAATATCAAGGAAGAACAATTTATCTGGTTGATACTGCTGGGTGGTTGCAGAGGACAAAACA GGATAAAGGTGCAGCATCCTTGAGCGTTATGCAATCAAGAAAGAGTCTACTCCGCGCTAATATAATTGCTTTGGTGCTAGATGCAGAAGAGATTGTAAAT GCTAAACGAAGTATGAAACATGCTGAAGTCGTTATAGCTAGACGGGCAGTGGAAGAGGGACGTGGCCTTGTTGTGGTTGTAAACAAGATGGACCTTCTAA GGGGCAAGAATAAATCATTATCCTATGAGAAGGTTATGGAAATTGTTCCTCAAGAAATTCAGACAGTTATACCCCAGATAACAGGAATCCCAGTGGTATT TACTTCAGCATTGGAGGGAAGGGGTCGAACTGCTGTCCTGAACCAGGTCGTTGATACATATGAAAAATGGTGTACAAGATTACCTACTTCTCGTCTTAAC CGATGGTTGAAGAAGGTTATGAGCAGGCATTCTTGGAAAGACCTGGCGGCGCAGCCGAAGATCAAGTACTTTACTCAGGTCAAGGCCCGGCCGCCGACAT TTGTTGCATTTATGAGTGGAAAGACTCAGCTTTCTGATACTGACATTAGGTTCTTAACAAAATCCTTGAAGGATGATTTTGATTTGGGTGGAATTCCTAT AAGGATCATGCAACGTTCTATCACTAAGAAAGAAGCAAGAAGCAGTAGTAGCAAGAGTAACCATTCGGTTTCAGCAAGTAGAGTGGCTGAAAGGGTCATG TCTGACAAGAGAAAAGTCATAGTTGAATGACAACATTATGAAGATGTAGCAGACCAGGATTTGGGAATTAGTTAGATGCTTACTGCAATTTATTTTTAAG TTTATTATCACGTCAAACGGTAAGGTTGTTTACCTTCTGATTTCGAGGTCACGAGTTCAAATCATAAAAACAATATCTTCGCTTGCAAAGATATGGTTAT ATATTTCTCAGACTTCATTAGATGAGAACCTCATGTATTAAACCGATCTTATGTTTGATTCGGAAATCTGAACGAATGAGTAGCACAATTACAAAATATT CAGTTGTATATATAATTTATGGATTGCCAATATTGAACATTATTGCTAATTCAGCAGGTGCACATTCCATGAAGCAGACATTAGAAAACTCAAATACACA ATGTAAATTGACAATTATCCACCAAAATAATTT
• Tissue: flowers
• Gene name: LI_gene_57581;
• Additional information: details;

Expression of Ll_transcript_225462

FPKM

• FPAB: 1.7
• FPNAB: 3.8
• LF1: 3.9
• LF2: 2.4
• LF3: 2.5
• LF4: 2.4
• UF1: 3.2
• UF2: 3.3
• UF3: 2.6
• UF4: 1.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_225462

• Blastp: GTPase Der from Parvibaculum with 39.54% of identity
• Blastx: Calreticulin-3 from Arabidopsis with 84.48% of identity
• Eggnog: GTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity)(COG1160)
• Kegg: Link to kegg annotations (Plav_3492)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420018.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;