Ll_transcript_225427

Id TrinityFTRINITY_DN56132_c0_g1_i5
Name TranscriptLl_transcript_225427
SequenceAAAGAAAATCAAAGTCAAATTAAGTATATTGAAATATATGCAAATCTAACATATCCAGAGAACATGGACTATTTTGGATTTAGATTTATTTATTCTCTTC AAAAAAGAAAGAAAGAAAAGGTTTGAATTAGGAAAATGCTGTGAACATCAAAACTTTCCTGTTAAGAAAATTACTACTATATATGGAGGGACCCACCCAC TCACCCATGTCCATGTTGATGTTGTATGGTTCTAGAAGGTACTGTTCCGTTGGTATTTAAAAGCAAGTTTAGCACAAGTAGAAAGAATGAGTGAATTAGA TGGGTACTATTAGTATTATCAAGTTTTGTCTTAACCTCTTCTTTTTCCTTCTACTTTCTCTATCCTATTCTACTTCCTCTTCCTTTGCTGAGGTTTTCTT TGAAGAGAATTTCCAAGATGGGTGGAAAAGCCGTTGGGTTTTGTCTGATTGGAAAAGGAGTGAAGGAAAAGCTGGTACCTTTAAGTACACTGCTGGAAAA TGGCCTGGAGATCCTGATGATAAAGGTATTCAGACATATAATGATGCTAAACATTATGCTATATCTGCTAAGATACCAGAGTTAAGCAATAAGAATAGAA CTCTGGTGGTTCAGTATTCTATTAAATTTGAGCAGGACATTGAATGTGGTGGTGGTTATATTAAACTCCTTTCTGGTTATGTTAATCAGAAGAAATTTGG TGGTGATACTCCTTATAGTTTGATGTTCGGACCAGACTTATGTCGCTCACAGACCAAGAAGCTACATGTTATACTATCATACCAGGGGCAGAATTACCCT ATTAGAAAGGATCTACAATGTGAAACAGACAAATTGACTCATTTCTATACATTTATTCTGAGGCCTGATGCCACTTATAGTGTCCCTGTCGATAATCGAG AAAGAGATTCTGGAAGCATGTACATAGATTGGGATATCCTTCCTCCAAAGAAAATCAAGGATGTCAATGCAAAAAAGGTCTGAGAGTTCATGTGTCAACC TGTATCTATGTCTTTTTCTTATTAGAATGATGTAATGGTGCAATCCTGCAATGTTCTTGTTTATTACTGACTGGATCCCTAAAGTCCTATGCTCTGAAAC AACTTAAACAGCATTCTATGAGATTATTTCATTGAAATACGAGAATTTTGGTTCGTTTTGCAAATCTTACATTATGTATCAGTCTACTTTTCTTGTAAAA CCTTTAACTTTCTCTATTGCAGCCAATAGACTGGGATGATAGAGAGTACATTGAAGACCCTAACGATGCCAAACCAGAGGTACTTTCTGTCCCCCGTTCC GCCCAAATCTTCCGATGTTAATGTGATTTCCCATCAAGATTGTAAGATCACAACCTTATTAGTATTTGCAGTTACATAAGAACCTTGATGATCACCTGTA GGAATTTCTATGAAAGGGTTTATTCTTCATTTCTATTTAATTACATACTCAGATGATAATTGCCTACTACAGCTAGCCGCACTATTAGAAAATGTTGGTT TTTTTGTTGATAGAGAGGCTTTTCAATTTTCAACAGAAATCTATAAAATTATAAGCATGGATAGAAGCACTTTCAATTAATTATTCTTTTATAACACATT GTTCTTCCTATGTTTATGTTTTCATTTGAGTGCTTATAACTGTCTTGATATGGCAGGGATATGATTCGATTCCGGCTGAAATTCCTGATCCAAAAGTCAA GGAGTAGCCTGTGGACTGGGATGAAGAAGAAGATGGACTTGAAAGCCCCCGAAAATTCCTAATCCAGCATACCAAGGACCACGGAAGCGCAAGAAAATCA AGAATCTCAACTACAAAGGAAAGTGGAAGATTCCATGGATCGACAACCCAGAATTTGAGGATGACCCTGATCTTTATATGCTGAAACCAATAAAGTATGT GGGCATTGAAGTGTGGCAGGTGAAAGCTGGTTCAATTTTCGACAATATCTTAACTTGTGATAGCAAGGCAAGTTGTGGAAGAATTTTTGTCTGATAACAG AGAGGAAGCACAGAGAGCTAGAGAAGAGGGTGAAAATAGGAGGAGAGAGAGGGATCATAAATATGGAGATAGGAAGAGGGATGAACTTTGAAATGTGCAG TGTCATTGTGGGTAGTTGTCCGAAGTGTGATTTGAAGCAATGTTGAATTGAATTGAATTGAATGCCATGTTTGAAGATATTTGAGTGTAGGACCAAAGGT GCAATTGCACTGTCCATGCCAAGCTGTATTAAACTGTATCATCTCACTAGATATGGGCACTACCCATTATGTTCATTTATTTTTCCATGGAATTAAAACT CACTACATTCAGATCCAAACATTTTCTGCCGGGGCGTTGGTTCAAGTGGTGCATGCTTGATTCTTCTTAAGCAAGGTCTCAGTTCGATTCTTGTGGATGA AAAAAATATCCGCTGGGAGAGTTAGCCCCACATATGGATGTTCCCGGCTATGACAAGATCGCCTCCAATGCGAGGACATCTGTGGGAAACAAAAAAAAAC TCATGAAACTTACCTGGGGTTACTTTTGTCTCTGCATTTGTTACGAGCTTCTTGAATTCTTGATTGTTCCATTTGTTCCAGCTATTTGAATAATTAAAGT ATGAACAAGTCTTTTGTGAATCAAAGTGTTCTTGTAAGTTCTTCTGCAGAACAAATACGACAGAATAAACAGGTGAACAGGAGCACATGTCTCGCTTATT GCCTTTGTTGAGGAGGCAGAGTCTTAATAATTTCCAGCGAAAGCGAATCAGTTGTAGCTTGATCCCCAATCCTGTCCACTTCCACACATTTATATTGCCT TTATTGGGACCAAGGTCCGTTTCTCCTTCATGCGAATTGGATGTAAGGGGTTTTTGTACTGTAACTGCAACACTTGGTGCAAGCCCTCTAGACGATGCTG GTGATGATATCGTTTTACAGGATACTAAGAAAACCTATGAAAAGCCTATTGATTTTACTCAAATTCAGATTACTCGCCTCCCCACTGTCATCATTCTAGG CCGACCTAACGTAGGCAAGTCTGCTTTGTTTAATCGTTTAATTCGGAGGAGGGAGGCTCTGGTGTATAACACCCCACAAGATCATGTCACCCGCGACATT CGAGAAGGAATTGCCAAGTTGGGTGATTTACGATTCAAAGTGTTGGACTCTGCTGGTTTGGAAGCAGAAGCGACTTCTGGCTCTATCCTCCACCGAACAG CTTCTATGACAGCTCATGTGTTAGCAGCATCTAACTTTGCACTCTTCCTCACTGATGCAAGAGCTGGACTCCATCCTCTTGATTTGGAAGTCGGAAAATG GCTGCGCAAACATGCACCTCAAATCAAACCTATTGTCGTGATCAATAAATCTGAATCGCTGTTTGATGCTAGCGGCTCTCTCGCGTCAGCTGCTAATGAA GTATGCCGGTTAGGATTTGGGGATCCTATTGCTATATCTGCTGAGACGGGACTTGGAATGCATGAATTATATCTGTCTCTTAGACCTGTGCTGGAGGACT ATATGCTTCATGTCTTGAATAATGAAGTTGCTCAGGATAATAGCTACAGTGAGGACAGTAGCTCCCCCGAGGTTGACACCAGTAAGCTCCCGATGCAGTT AGCAATTGTAGGACGACCTAATGTTGGGAAATCAACCTTACTGAATTCATTGTTAAAAGAAGACCGTGTTCTTGTGGGTCCTGAAGCGGGTCTGACAAGA GATTCAATCAGAACCCAGTTTGAATATCAAGGAAGAACAATTTATCTGGTTGATACTGCTGGGTGGTTGCAGAGGACAAAACAGGATAAAGGTGCAGCAT CCTTGAGCGTTATGCAATCAAGAAAGAGTCTACTCCGCGCTAATATAATTGCTTTGGTGCTAGATGCAGAAGAGATTGTAAATGCTAAACGAAGTATGAA ACATGCTGAAGTCGTTATAGCTAGACGGGCAGTGGAAGAGGGACGTGGCCTTGTTGTGGTTGTAAACAAGATGGACCTTCTAAGGGGCAAGAATAAATCA TTATCCTATGAGAAGGTTATGGAAATTGTTCCTCAAGAAATTCAGACAGTTATACCCCAGATAACAGGAATCCCAGTGGTATTTACTTCAGCATTGGAGG GAAGGGGTCGAACTGCTGTCCTGAACCAGGTCGTTGATACATATGAAAAATGGTGTACAAGATTACCTACTTCTCGTCTTAACCGATGGTTGAAGAAGGT TATGAGCAGGCATTCTTGGAAAGACCTGGCGGCGCAGCCGAAGATCAAGTACTTTACTCAGGTCAAGGCCCGGCCGCCGACATTTGTTGCATTTATGAGT GGAAAGACTCAGCTTTCTGATACTGACATTAGGTTCTTAACAAAATCCTTGAAGGATGATTTTGATTTGGGTGGAATTCCTATAAGGATCATGCAACGTT CTATCACTAAGAAAGAAGCAAGAAGCAGTAGTAGCAAGAGTAACCATTCGGTTTCAGCAAGTAGAGTGGCTGAAAGGGTCATGTCTGACAAGAGAAAAGT CATAGTTGAATGACAACATTATGAAGATGTAGCAGACCAGGATTTGGGAATTAGTTAGATGCTTACTGCAATTTATTTTTAAGTTTATTATCACGTCAAA CGGTAAGGTTGTTTACCTTCTGATTTCGAGGTCACGAGTTCAAATCATAAAAACAATATCTTCGCTTGCAAAGATATGGTTATATATTTCTCAGACTTCA TTAGATGAGAACCTCATGTATTAAACCGATCTTATGTTTGATTCGGAAATCTGAACGAATGAGTAGCACAATTACAAAATATTCAGTTGTATATATAATT TATGGATTGCCAATATTGAACATTATTGCTAATTCAGCAGGTGCACATTCCATGAAGCAGACATTAGAAAACTCAAATACACAATGTAAATTGACAATTA TCCACCAAAATAATTT BLAST
Tissueflowers
Gene nameLI_gene_57581; 
Additional informationdetails; 

Expression of Ll_transcript_225427

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_225427
BlastpGTPase Der from Parvibaculum with 39.54% of identity
BlastxCalreticulin-3 from Arabidopsis with 85.28% of identity
EggnogGTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity)(COG1160)
KeggLink to kegg annotations (Plav_3492)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019420018.1)
Pfam50S ribosome-binding GTPase (PF01926.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;