Ll_transcript_227433

• Id Trinity: FTRINITY_DN56134_c0_g2_i2
• Name Transcript: Ll_transcript_227433
• Sequence: TGTAGACTCATAATTCAGAAACAGCATATAGGTTTTGCAGCCGACGGAGAACCGCTTCCACCGTCGCCTCACTCCACTTGTTCCGCCGCCGTCAATAGTC ATGGGAAAGAACAGTAATAAATTGAAAGAAAATGGGAAAGAACACTCCAACTTAACCATTTTCGTTTCTAACTTACCTTACTCTTTTTCCAACACTCAGC TTGAGGAAACGTTTAGTGATGTTGGACCTGTCAGGCGTTGCTTTATGGTTACACAAAAGGGGTCTGCTCAGCATCGTGGTTTTGGTTATGTGCAATTTGC TGTTGAGGAAGATGCTATCCGTGCTATTGAGCTGAAGAATGGTTCACCTGTTGGGGGTCGGAAAATTGCAGTGAAGCATGCAATGCCTCGTCCTACTCGT GAGGCACGACAGTCGAAACCAAATCAAGCGGGTAAGACAGATGACCGCACAGAGTCAAAAAATGATGATAAAGATGGCATATCTTCTGAAGCAGATAAAC CTGTTTCAGTTTCAGATAAACCCGTTTCAGTTTCAGATAAACCTATTTCAGTTTCGAAGAAAGAAGAGGTACAAGTGTCAAATAAGCAAAGGATCTCAAA GAAGCCCATGGAAGTAAGAAAAGCAGCTCTCTGCAATGACATACCGGATGAGGGCTCAGAAAAACAGAGGGTTGCTAGAACTGTTATATTTGGTGGTCTC AAGAATTCTGACATGGCTGAACATGTTCACCGCCAAGCCAAAGAGATTGGCACTGTATGTTCTATTAAGTATCCACTTCCAAGGAAAGATCTTGATCATG GTCTCCTGCAAGATGGCTGTGTTTTGGAGGCTTCTGCTGTACTTTATACAAGTGTAAAATTAGCCCGAGCTGCTGTTGCATCATTACATAAAAAGGAGAT AGGTGGGGGAACTGTTTGGGCAAGACAACTGGGTGGAGAGGGCTCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAGAGAA GATGAAATAAGGGATATATTTGCATCTGCAGGGTATGTGTGGGATGTATTCATTCCACGCAAATCAGACACGGGTCTGTCTAAGGGCTTTGCATTTGTAA AATTCACGTGCAAGCAAGATGCAGAAAATGCCATTCAAAAGCTCAATGGATTTACATTTTCAAAACGGCTCATAGCAGTTGACTGGGCTGTTCCAAAAAA GATATTTAACAGTGATGCAAATGCTGCTCTTGCTTCAGAAGAAGGAGAAGAAAAGGTGAACGATGAAGATGGTAGTGCTACCGAGAGTGATGGAGATGAC AGTGATTTAGATTCTTCTAGTGCCGTGGAAGAGGATGGTGCTCCCTCTGAAATTAATTTTGAAAAGGAAGCAGGCATTGCAAGGAAGGTTCTTAACAACT TGATTACATCCTCCACCAAAGGAGCATCAGTAAATAATGATTCTGTGTTGAGAGGAAACGAGGAGCCAAAATCCAATGAAATTGTTAAGGATGCAGATAA TAAAGCATCTGATGAGACTGAAAAGGTTTTAGATGTTTCTAAGCCTGAAATCTCCGACAAAAGCAAGTTATCAAATCTCAAGCAAGCAGAAGAAGCTGAT TTGCAGAGAACAGTTTTCATAAATAATCTTCCTTTTGAATGTGACAATGAAGAAGTGAAGCAACGATTTTCTGGATTTGGGGAAGTGGAATACTTTGCTC CTGTTCTCCACCAAGTGACGAAGCGACCAAGAGGAACTGGTTTTCTCAAGTTTAAAACCGTGGAAGCAGCTGATGCTGCAATTTCTGCAGCCAGTGCTGC TTCCGGCGTGGGCGTTCTACTGAAAGGTAGAGCATTAAAAGTTTTGAAGGCTTTGGATAAAAAATCGGCACAGGACAAGGAAGTGGAGAAAGCTAAAAAT GAGGTTCAAGACCACCGAAATCTTTACTTGGCAAAGGAGGGACTCATTCTTGAGGGAACACCAGCTGCTGAAGGGGTTTCATCCACTGATATGTTAAAAC GCCAAGAGTTGGAAAGGAAGAAGAAAACAAAGCTACAATCACCAAATTTCCATGTTTCAACAACCCGGCTTATCATCTACAACTTGCCCAAGACCATGAC TGAAAAGCAACTGAAGAAGCTTTGCATTGATGCAGTCAAATCTAAAGCTACCAAGCAAACACCTTTAATTCGCCAGATAAAGTTCTTGAAAGATGGAAGG AAAGGAAATGCTGTTCCAGAACGCTACTCACGTGGAGTTGCCTTCGTTGAATTTTCAGAGCACCAGCATGCCCTCGTGGCTCTGAGAGTTCTTAACAACA ATCCTGAAACTTTCAACCCGGAACATCGGCCGATTGTGGAGTTCGCTCTTGATAATGTTCAAACATTGAAACTTAGAAAGGAAAAGCTTCAATATCAGCA GCAAGCTCCTCATGCTGACAACAATGGCAAGGAAGATGGTGAACCGGGCAAAGAACTAGGTCATGTGCATACCAAGGACAGAAAACGAAAATCTCAAGAA CCTGGCAAATCAGCAACGAAGGATTCAGCAGTTAGTACAAATAATGAATCAGGTGGTGCAGTGGCAAGTGAAAAATCCCCTGAAGGACACAAATTCAAAA AACAGAAAGGCAACCATAAGAATAAAAGTGCTGAAGAGTCTTCGCTAAAACAAAATTCAGATACCTTGTCTAGGAAGCCGAGGAATGAAAAAGGTGGCCG GAATCATGGTAATACATCACATGAAGCTCAAAACACTACCATTGACACCAATAGAATAAAGGCAGGAAACAAAGTTGATGTTGGATTTAGAAAAAGGAAG CTGCAAAACCAAGAAGAGCCGGTGCAAGATGCTTCCAGAAAACGGACTAAAAAGAAGAAAGCTCCAGTAGGGAAAGAAGCAGTAGATAAGCTTGACATGC TTATAGAACAATATAGATCCAAGTTCTCACATAAAGGTTCTCAAGGGAATGATGGTGACAAAAAACCTTCCAAACAGCTTAGGAAATGGTTTGAATCATA GATAACTATTACCATACTATGATCTATGAATTCGTCTCTTAAAAATACCATTTTTCTTTACAAATGTCAGTTGTTACTAGCTCCTAAAGTTGAAGAGTGT GACATTATTTGCATGGTGCCTTGTGCTGGTTATCTCCCATCCCCTGATCCTCTAATTTTTGGAAATATTCTGCAACATTTTTGTCATTGTTTGTAATGTT TGAGGAATGTGCAATAGATTGAGAATTTTTGCTATATATTCCTGGATTTGTTTGTTTATTTGATAGATACTATGTATTGATTTTAATATAGGTGAGAACT GAGAAGACATTTTAATGCAGGAAAAATAATAGAGTGGAAGAACAATGGATATATCATTA
• Tissue: flowers
• Gene name: LI_gene_57598;
• Additional information: details;

Expression of Ll_transcript_227433

FPKM

• FPAB: 5.8
• FPNAB: 11.7
• LF1: 5.4
• LF2: 4.4
• LF3: 5.4
• LF4: 7.3
• UF1: 3.9
• UF2: 3.6
• UF3: 7
• UF4: 5.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_227433

• Blastp: RNA-binding protein 28 from Homo with 36.44% of identity
• Blastx: RNA-binding protein 28 from Homo with 36.44% of identity
• Eggnog: RNA binding motif protein 28(ENOG410XSHP)
• Kegg: Link to kegg annotations (55131)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453431.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;