| Id Trinity | FTRINITY_DN56134_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_227436 |
| Sequence | TGTAGACTCATAATTCAGAAACAGCATATAGGTTTTGCAGCCGACGGAGAACCGCTTCCACCGTCGCCTCACTCCACTTGTTCCGCCGCCGTCAATAGTC ATGGGAAAGAACAGTAATAAATTGAAAGAAAATGGGAAAGAACACTCCAACTTAACCATTTTCGTTTCTAACTTACCTTACTCTTTTTCCAACACTCAGC TTGAGGAAACGTTTAGTGATGTTGGACCTGTCAGGCGTTGCTTTATGGTTACACAAAAGGGGTCTGCTCAGCATCGTGGTTTTGGTTATGTGCAATTTGC TGTTGAGGAAGATGCTATCCGTGCTATTGAGCTGAAGAATGGTTCACCTGTTGGGGGTCGGAAAATTGCAGTGAAGCATGCAATGCCTCGTCCTACTCGT GAGGCACGACAGTCGAAACCAAATCAAGCGGGTAAGACAGATGACCGCACAGAGTCAAAAAATGATGATAAAGATGGCATATCTTCTGAAGCAGATAAAC CTGTTTCAGTTTCAGATAAACCCGTTTCAGTTTCAGATAAACCTATTTCAGTTTCGAAGAAAGAAGAGGTACAAGTGTCAAATAAGCAAAGGATCTCAAA GAAGCCCATGGAAGTAAGAAAAGCAGCTCTCTGCAATGACATACCGGATGAGGGCTCAGAAAAACAGAGGGTTGCTAGAACTGTTATATTTGGTGGTCTC AAGAATTCTGACATGGCTGAACATGTTCACCGCCAAGCCAAAGAGATTGGCACTGTATGTTCTATTAAGTATCCACTTCCAAGGAAAGATCTTGATCATG GTCTCCTGCAAGATGGCTGTGTTTTGGAGGCTTCTGCTGTACTTTATACAAGTGTAAAATTAGCCCGAGCTGCTGTTGCATCATTACATAAAAAGGAGAT AGGTGGGGGAACTGTTTGGGCAAGACAACTGGGTGGAGAGGGCTCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAGAGAA GATGAAATAAGGGATATATTTGCATCTGCAGGGTATGTGTGGGATGTATTCATTCCACGCAAATCAGACACGGGTCTGTCTAAGGGCTTTGCATTTGTAA AATTCACGTGCAAGCAAGATGCAGAAAATGCCATTCAAAAGCTCAATGGATTTACATTTTCAAAACGGCTCATAGCAGTTGACTGGGCTGTTCCAAAAAA GATATTTAACAGTGATGCAAATGCTGCTCTTGCTTCAGAAGAAGGAGAAGAAAAGGTGAACGATGAAGATGGTAGTGCTACCGAGAGTGATGGAGATGAC AGTGATTTAGATTCTTCTAGTGCCGTGGAAGAGGATGGTGCTCCCTCTGAAATTAATTTTGAAAAGGAAGCAGGCATTGCAAGGAAGGTTCTTAACAACT TGATTACATCCTCCACCAAAGGAGCATCAGTAAATAATGATTCTGTGTTGAGAGGAAACGAGGAGCCAAAATCCAATGAAATTGTTAAGGATGCAGATAA TAAAGCATCTGATGAGACTGAAAAGGTTTTAGATGTTTCTAAGCCTGAAATCTCCGACAAAAGCAAGTTATCAAATCTCAAGCAAGCAGAAGAAGCTGAT TTGCAGAGAACAGTTTTCATAAATAATCTTCCTTTTGAATGTGACAATGAAGAAGTGAAGCAACGATTTTCTGGATTTGGGGAAGTGGAATACTTTGCTC CTGTTCTCCACCAAGTGACGAAGTATGTCCTAGAGCATTATTTTCTGTGTCTCTATTTGACTGAACATTATTTCACAGACCCCTTTTCCTCAATGCAGGC GACCAAGAGGAACTGGTTTTCTCAAGTTTAAAACCGTGGAAGCAGCTGATGCTGCAATTTCTGCAGCCAGTGCTGCTTCCGGCGTGGGCGTTCTACTGAA AGGTAGAGCATTAAAAGTTTTGAAGGCTTTGGATAAAAAATCGGCACAGGACAAGGAAGTGGAGAAAGCTAAAAATGAGGTTCAAGACCACCGAAATCTT TACTTGGCAAAGGAGGGACTCATTCTTGAGGGAACACCAGCTGCTGAAGGGGTTTCATCCACTGATATGTTAAAACGCCAAGAGTTGGAAAGGAAGAAGA AAACAAAGCTACAATCACCAAATTTCCATGTTTCAACAACCCGGCTTATCATCTACAACTTGCCCAAGACCATGACTGAAAAGCAACTGAAGAAGCTTTG CATTGATGCAGTCAAATCTAAAGCTACCAAGCAAACACCTTTAATTCGCCAGATAAAGTTCTTGAAAGATGGAAGGAAAGGAAATGCTGTTCCAGAACGC TACTCACGTGGAGTTGCCTTCGTTGAATTTTCAGAGCACCAGCATGCCCTCGTGGCTCTGAGAGTTCTTAACAACAATCCTGAAACTTTCAACCCGGAAC ATCGGCCGATTGTGGAGTTCGCTCTTGATAATGTTCAAACATTGAAACTTAGAAAGGAAAAGCTTCAATATCAGCAGCAAGCTCCTCATGCTGACAACAA TGGCAAGGAAGATGGTGAACCGGGCAAAGAACTAGGTCATGTGCATACCAAGGACAGAAAACGAAAATCTCAAGAACCTGGCAAATCAGCAACGAAGGAT TCAGCAGTTAGTACAAATAATGAATCAGGTGGTGCAGTGGCAAGTGAAAAATCCCCTGAAGGACACAAATTCAAAAAACAGAAAGGCAACCATAAGAATA AAAGTGCTGAAGAGTCTTCGCTAAAACAAAATTCAGATACCTTGTCTAGGAAGCCGAGGAATGAAAAAGGTGGCCGGAATCATGGTAATACATCACATGA AGCTCAAAACACTACCATTGACACCAATAGAATAAAGGCAGGAAACAAAGTTGATGTTGGATTTAGAAAAAGGAAGCTGCAAAACCAAGAAGAGCCGGTG CAAGATGCTTCCAGAAAACGGACTAAAAAGAAGAAAGCTCCAGTAGGGAAAGAAGCAGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGT TCTCACATAAAGGTTCTCAAGGGAATGATGGTGACAAAAAACCTTCCAAACAGCTTAGGAAATGGTTTGAATCATAGATAACTATTACCATACTATGATC TATGAATTCGTCTCTTAAAAATACCATTTTTCTTTACAAATGTCAGTTGTTACTAGCTCCTAAAGTTGAAGAGTGTGACATTATTTGCATGGTGCCTTGT GCTGGTTATCTCCCATCCCCTGATCCTCTAATTTTTGGAAATATTCTGCAACATTTTTGTCATTGTTTGTAATGTTTGAGGAATGTGCAATAGATTGAGA ATTTTTGCTATATATTCCTGGATTTGTTTGTTTATTTGATAGATACTATGTATTGATTTTAATATAGGTGAGAACTGAGAAGACATTTTAATGCAGGAAA AATAATAGAGTGGAAGAACAATGGATATATCATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57598; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_227436
| Blastp | RNA-binding protein 28 from Homo with 29.93% of identity |
|---|---|
| Blastx | RNA-binding protein 28 from Homo with 43.72% of identity |
| Eggnog | RNA binding motif protein 28(ENOG410XSHP) |
| Kegg | Link to kegg annotations (55131) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453431.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |