Id Trinity | FTRINITY_DN56136_c1_g2_i1 |
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Name Transcript | Ll_transcript_225332 |
Sequence | AAATAATAAAAAGTGAGGGGCGAATATGTACATCCACCATTGAGATATTTTGGAGCTATAAGCGGCAGATATTTTGGATGCAGTCAATCCAATTCCCGTG AATCATGCACCGCAACAGCACTTTCTTAACCTTGGTTCAACCCACGTCCCTTAACCCTAGTTAACCACTTCACCCTATATAACCACCCCTTCAGGGTATT GCTAAAACTCGTGCTCTCTTCACTATCTTCTCTTTCTTATACTCATTTAGATATTTTAGTTTCAATGGCTTCTGCTGATGTTGAGTTCCGTTGCTTCGTT GGTGGGCTTGCATGGGCCACCGATAGCGAAGCTCTTGAGAAGGCTTTCTCCCAATACGGAGAAATCCTTGATTCGAAGATTATCAACGATCGTGAAACTG GAAGGTCCAGGGGTTTCGGATTTGTTACCTTCGCATCTGAGCAATCAATGAAGGACGCGATCGAGGGTTTGAATGGCCAGGATCTTGATGGACGTAACAT CACTGTCAACGAGGCTCAGTCCCGCGGTTCCGGTGGTGGAGGCGGCCGTGGTGGAGGCGGTTATGGAGGTGGTGGCGGTGGATTCCGCAGCGGCGGTGGA GGTGGATATGGTGGTGGACGACGTGAAGGTGGTGGCGGTGGTTACAACAGAAATGGTGGAGGAGGAGGATATGGTGGTGGTGGCGGTGGAGGAGGATATG GCGGTGGCAGAGACCGTGGTTATGGAGGAGGAGGAGATGGCGGATCCCGCTACTCTCGTGATGGTGAATCTGGCGGCGGTGGCTGGAGGAACTAAGTACT TGTTTAGCATGTTAATTGCTTTATTTGGATTAGTGTTTACTCTTGTTGCGTGTTAGGGTCTGGGTTTCTGCTAGTTTAATTATCTGCTTTGGTCTCATTG TGATGGTTCTTATTTTTGACCGCAATATATATGTACTTCATATTTATGGAATCTAAAACTACAAAAATTCAGAGCCCATTCTTTTCATGTAGTCAAATCT TATATTCTGCAAATGTCTGTTATTGGAGTAGTTATAAGAAAATGATATCCTAAATATTGATGGTGTTAAATGCAGGCTTTACGTTGGGGTTTAGATAATT TCTGGCAGTAGTTATAAGAAAATGATATC BLAST |
Tissue | flowers |
Gene name | LI_gene_57610; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_225332
Blastp | Glycine-rich RNA-binding protein GRP1A from Sinapis with 87.06% of identity |
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Blastx | Glycine-rich RNA-binding protein GRP1A from Sinapis with 87.06% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000217) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454173.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |