Ll_transcript_227311

• Id Trinity: FTRINITY_DN56139_c0_g2_i1
• Name Transcript: Ll_transcript_227311
• Sequence: TTCGGCTTCGATTAGGGTTTTTTCTTCTCACCTTCGATTAGGTTTTCTTTCTCACATTCGATTAGGGTTTGGTTGTTCATCTCACATTCGATTAGGTTTT CTTTCTCACCTTCGATTATGGTTTGGTTGTTCATCTCACCTTCGACTCGGTTTGCTCACCTTTGATTCGGGGTTGGTTAAAGAACTAAGGTTGAACGAAG TCGGCAGAAATTACATCTCCAAGATCACTCATGATCAACTTAGGGTTCGACTCCATTGATAAGCATCCTAAACCCTTACCTATTTTTAGTTCCTTATGTA CTTATTGCATTTATTCATGCATGTTGTTGTGCTGTGATTATTGATTTAGGGTTCATAATTAATATTAGGGATTCTGTTAACTAGCCATGTGCTTTATGAT AGATCCCTGATTCATGTATATGTTAATTTTGTATGTCTTCTATGAACAAATTAACCGGGAAACAAAACATAACATGCTTATAGGAAGATAACCCATGATT GAGGCTGTTTTATTCATTTTTTTTTTTTTTTTTTTTTTATTAGAACTTTGATAGGAGATATAAGACATAAATATCAAAATATTACATGTTTTGAGATATA ATAATGAATTAACGTTGTAATGCGATTAAAATTTGTGAGAGTGTTGTTTGGTCTATATAAGTACTTTGGAGGAAGTTAAGAGATGAGCAATTAAGTGAGT GAACAAAATGTCTATCCAACAATCTCTACTAGACAAGCCAAGTAAACCAGTTTCGAAAATTTTGTGGTTAATCCTCTCTATAGCTATTGTCTTAACCTCA CTACTCCTTATTTCTTCTTATATGATCAAACCCACCCCATTGCTCAATCCCTCATCATCTCTCAACATATGTGAATATGCTATTGACACAAACTCATGCT TAGCCCATGTCTCAGAAGTCACTCAAGTTTCAAACTTGGCCATCACCACACAAAGCTACAAACTCAAGTTGCTTCAATCCATCCTAAAAAGGACCACTTC ACACATTCTCAAAGGAATAGACACAGCCAATGCTATCAAACTGAAAAGCAGAAATAGTCGGAAGGATGAAGCAGCTCTACATGACTGTGAAGAGCTCATG GACTTGTCCAATAGTAGAGTTAAGGACTCAATGGTTGCTCTAAGTAAAAGGACAATTGATTCAATGCAAGATGCACACTCATGGCTAAGTAGTGTGCTCA CTAACCATGTAACTTGCTTGGATGGACTAGAGGGTTCAGCTAGGGCCCTTATGGAAGCTGAGATTCAGGACTTGATATCCAGATCAAGAACCTCTTTGGC TTTGCTGGTTGCTATTTTGCCTCCAAAACCGAAGGGAAAAGGAGTGATTGATGAAGTAGTTAATGGGAGATTTCCGTCATGGGTAAGAAGGAAGGATAGA AGGCTTTTGGAGTGCTCAGTTGGGGAGATTGAGGCTAACGTTGTAGTGGCTAAGGATGGGAGTGGTGAGTTTGAGACAGTAGCTGAGGCTGTAGCAACTG TACCGGACAAAAGTATGAGAAGATATGTGATATATGTGAAGAATGGAACATACAATGAAAATGTTGAAATCAATAGCAAGAAGAAGAATGTGATGCTAGT TGGTGATGGTATGAATGCAACTATAATCACTGGAAGCTTGAATAATGTGGATGGCACTAGCACCTTCAGGTCCGCCACTCTTGCTGCTGTTGGCGATGGG TTTATAGCTCAGGATATGTGGTTCCAAAACACAGCAGGCCCAGAGAAGCACCAGGCCGTGGCTCTTCGTGTGGGGGCAGACCAGTCAATCATAAACCGCT GCCGCATTGATGCATACCAAGACACTCTGTATGCCCACAGCAACAGGCAATTCTACCGCGACTCCTTCATAACTGGCACCGTTGACTTTATATTTGGGAA TGCCGGTGTCGTGTTTCAAAATTGCAACTTACAGGCCCGAAAGCCCATGGATAACCAAAACAACATGGTCACGGCCCAAGGAAGAGACGATCCAAACCAA AACACTGGGACTTCAATTCAACAATGTCAGCTAACACCAAGCCCAGATCTTGAGCCCGTTCTTGGCTCCATAAAAACATATTTGGGCCGCCCTTGGAAGA ATTTCTCTAGAACCGTTGTGATGGAATCATCCATTGAGAAGCATATTGATCCAGCAGGATGGGCCGAATGGGATGCAGAACATAAGGATTATTTGGAAAC ATTGTACTATGCAGAATACATGAACAATGGGCCAGGTGCTGGTGTGGGCCGGAGAGTGAATTGGTCTGGTTTCCATATCATAGGTGCTGAAGAGGCCGAC AACTTCACAGTGAAAGAACTCATACAGGGTGATGTTTGGTTAAAGAACACTGGGGTCACCTTCATTGAGGGGCTCTAGTGTTATCAACACTTCATTCAGG GGCTCTACTCACTACTCTTATATTTCACAACTTATGCTGCTATTAGTTCAGACTGTCATAGTCATAGTCCAAACTATGCAATGCTTGTTTATGATCTTAG CGTTTTGAGCAAAAATAAAATAAAAATCTAGTACTCACATTTTGAATTTATAGTATGTGCCAAATTTCAATAAATGTAGAATAAAATGGGTAAAATGTTA TACTTTTATTGTTAGTAATATTAGTGATTTTATTCTTCACTGTTTAGAAC
• Tissue: flowers
• Gene name: LI_gene_57648;
• Additional information: details;

Expression of Ll_transcript_227311

FPKM

• FPAB: 0
• FPNAB: 1.4
• LF1: 9.3
• LF2: 7.7
• LF3: 2.5
• LF4: 6.5
• UF1: 6.3
• UF2: 13.1
• UF3: 5.3
• UF4: 4.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_227311

• Blastp: Pectinesterase 2.1 from Lycopersicon with 54.56% of identity
• Blastx: Pectinesterase 2.1 from Lycopersicon with 54.56% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (544289)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422238.1)
• Pfam: Plant invertase/pectin methylesterase inhibitor (PF04043.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;