Ll_transcript_227319

• Id Trinity: FTRINITY_DN56139_c0_g2_i4
• Name Transcript: Ll_transcript_227319
• Sequence: CTAATACCGATACATACATATTTTTAACTGTGTCAGTAGAAAGAATATTTGTAGGGTGGAGTATATATGTCTCATGTCTTGTTCTATATAAGGACTATCG AGAAAGCAAATATGAGAAAGAGCAGCCACTAAGAAGAAGCAACATGGCTACCCAACAATCTCTTCTAGACAAGCCGAGTAAATCTCTTTCCAAAACTTTC TTCTTAGTCCTCTCTGTAGCTACTGTCTTAAGCTCATCTCTCTTTATTGCTTCTTATCTCATCAAACCCACCTCCTCCTCCTCCTCCTACTTTAACCTAT CCTCTCCTCACTATGCTTGTGAACATGCCATTGACACAGCATCGTGCCTTGCTCATTGCTCAGAAGTAGCTCAACCACAAGCCCAAAAACTCTATTTGCT CCAATCCATCTTAATCAAATCTACCTCAGACATGCAAAAAGCCTTACAAAACACCAACCATGTCAAACTCCGGACCAATAATCCAAAGGAGCAAGCAGCC TTGGTTAATTGTGAGGAGTTGATGGACATATCCATGAATAGAGTTTGGGACTCAATCATGGCTCTAGCTAAAAATACAACTAGTTCCATGCAAGATGCAC ATTCTTGGCTAAGTAGTGTGCTCACTAACCATGCAACTTGCTTGGATGGACTAGAGGGTTCAGCTAGGGCCCTTATGGAAGCTGAGCTTGAGGACTTGAT ATCTAGATCTAGAACCTCTTTGGCCTTGCTTGTTGCTATTTTGCCTCCAAATCCAAATGGTGAAGGACTCATTGATGAGCCACTAAATGGTGGCTTTCCC TCATGGGTAACAAGCAAAGATAGGAGGCTTTTGGAGTCTTCAGTTGAGGCGATCGCTGCCAATGTTGTGGTGGCAAAGGATGGCAGTGGAAAATTCAAGA CGGTGGCGCAAGCAGTGGCATCGGCACCTGACAATGGTAAGACAAGGTATGTAATCTATGTGAAGAAGGGAACATACAAAGAGAAAGTTGAAATCAGTAG CAGGAAGAAGAATGTGATGTTGGTTGGTGATGGTATGGATGAAACTTTAATCACTGGTAGCTTGAATTTTGTGGATGGAACAGGCACCTTCGACACTGCC ACTGTTGCTGCTGTTGGTGATGGGTTTATAGCCCAAGACATTTGGTTCCAAAACACAGCCGGAGCAGCAAAGCACCAGGCGGTGGCTCTCCGTGTCGGTG CTGACCAATCCGTCATAAATCGGTGCCGCATTGATGCCTTCCAAGACACTCTCTATGCCCATTCTAACAGGCAGTTCTACCGTGACTCCGTCATCACCGG CACCATTGACTTCATATTTGGAAATGCAGCCGTTGTATTCCAAAACTCAAAGCTTGTGGCCCGTAAGCCTTTGAGTAATCAGAACAACATGGTGACAGCC CAAGGAAGAGTAGATCCAAACCAAAACACAGGAACTTCAATCCAAAAATGTCAACTAACACCAAGTTCAGATCTTAAACCTGTTGTTGGGTCAATCAAAA CATATTTGGGGCGACCATGGAAGAAGTATTCAAGAACAGTTGTTTTGCAATCTACAATAGATAGTCATGTTGATCCATCAGGATGGGCTGAATGGGATGC TGCCTCTAAAGACTTTTTGGACACATTATATTATGGAGAATACTTGAACAGTGGTGCTGGTGCTGGTACTAGCAAGAGAGTGAAATGGAAAGGGTATCAT GTCATCACAAATGCTGCAGAGGCCAGCAAGTTCACTGTTAAACAACTCATCCAAGGTGATGTTTGGTTGAAGAACACTGGAGTCACCTTTATTGAAGGTC TCTAGTTACCTTATTGTATTATGGGCTTAAGAGGAGACTAAATCCGTGCTTCTCTTTCCAATAAATAAACCAGATTTGCGTTCTTAACCACTTTTAATAC AACCCTTGTACTCTCCATTACCATTTAATTAAGAAAGGGAAAAGGGAAAGACAATAATGATACATAGCAAACAGGAAATGCTGCATGTCACTAGATTATA GGAAACAAAAAGAAAGGGAA
• Tissue: flowers
• Gene name: LI_gene_57648;
• Additional information: details;

Expression of Ll_transcript_227319

FPKM

• FPAB: 175.3
• FPNAB: 21.1
• LF1: 82.2
• LF2: 118.7
• LF3: 92.8
• LF4: 53.4
• UF1: 70.7
• UF2: 145.9
• UF3: 57.7
• UF4: 52.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_227319

• Blastp: Pectinesterase 2.1 from Lycopersicon with 56.51% of identity
• Blastx: Pectinesterase 2.1 from Lycopersicon with 59.36% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (544289)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421053.1)
• Pfam: Plant invertase/pectin methylesterase inhibitor (PF04043.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;