| Id Trinity | FTRINITY_DN56142_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_226987 |
| Sequence | GTTTGAATTAGTGGTAAATCCAAACTATTAGATTTCCAATGAATTGATGACTAAGATACTCTTTGAGTAACTTGATCCCCTCCCAAATTCTAGTGTAACA AAATTTTCTGTGGACCACAGATTATGCAGAATGTTATGAAGGACAATCATGTTTTAATTTCTCTTGGTTCATGTATTTTTTTAATTAATACAAGAAGGAA AAGTAGTATATATATATGTTCTAGCTAGTTCCCTACGTCATGTTTGTGTATGTAAAATGACATGCAACGTATGAAAGATGAAGTTCATATAACCATGGGG AGCATAAGAAATCTAGCAGAATCACAATAGGCCCAAAATTAGCATAAAGTAAACACCTGAGAGTATTTAATTAGGGAAATAGCAATAAGGCTGTCTTGAA TTATAGGAGAGAGAAAGAGATAGAGGGAAAAAATACACTGTTCTTTCTACTCCAATCATTACTCAGCCTTTAGCTACTAAAATATTCTTTAAGCAAACGG AAAACAAGTTCTAATCTGACAATTGCAAAAGTAGGGTTTTTACTATGCTTCTAGGGTTTTTGCATACTACAAATGCTATCTCTCCATACTCAACATTTTT AATTCGCCTATTTAGTTATAAGGGCTTTCAATTTCCCAATTCTGTTATCAACTACTATAGTGGATGCTATTCTAATCTAATCAGTATAAATTGTTAGTTT AGTTTAAAATTGGGTTGAAGCTAATTGTATGAATCAAGTTATAAAGAAACAATTATAGGCACCATATATATAGTAAGACAATTTTACCATCCATATTATA TATCTTCTCAAGAAGCCAATTGTTTGAAAGCTTTTGCACTTTGACTCTCCTTAATTTGGTTTCTCTTCTTTTTCTTCTTCTTATATGGAATCCCTCTTGC CTTCCCCTGGCACTCCTTTACCTCACGGAGGTGAATCCGAATGGCTCCGCTTCCAAAGGGATTAGTCTCTGGCAATCCACCGTGCTCCTCATAGGCGGCT CGGAGCCGTCCGATGAGGGCATCGAGACTGCCCCAAGCCTGCCTAAGAGGACACGCGCAAGGCGCCGGAGGCGCGGGTTGACCAAAGAAGATGCAACTTT GGAGATGGACCTTGGTCTTCCCAAATTGGTCAAGGTACCTAAGGAACTCTATGACATGGTTGAAGTTGCACTGAGAGAGTGGAACTGGAGGGCTCTGATT GTTCAGGTACTGGCCAAAGGTGTTCCAATCTCTCTTCTTTTGAGACTCATACCGGCTCAATGGTTGTGGTTGCTGATGATGTTGTTGTTGTTGATCGGAG GGAGCTTGTGATGAAGATGAGGATCCATGAGTGGAACTATTTTGCATATGGTTAGACATGGTAACTGTGTGAAATGTAGAGGAATAGGTAGTAGGGGTAT GGAGTTATTGAGAAGAAAGAAATATCAAGACGATTGTGAGTGGGAATGAGGTTAAAGAATATGTGTTAGTGCACTGGAGAAAGTTCTAATGATGTTTCAT TCTCTATTTCGAACCATTATATATTGCTAAATAAATAGAAGAATTTTTTTAAAACAAAATATAATAAAAAGTAATTTTTTGTTTGGTCTGAAACAAAGAA TAAAACATCGTTTGGAACATGTAATCTGCAAAATCACATCCACAGCAGAATGGTGTCTTTTTAGAGGACATGTCATGGGCCCTATCAAGGTGCTTTTGTT CTCCTTTTTCTTCCTTCTCCTCTATCTCTCTTAAATTCGTGTTTTTTCTACTTTTTACCTATTTACTCTGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57671; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226987
| Blastp | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 from Arabidopsis with 72.11% of identity |
|---|---|
| Blastx | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 from Arabidopsis with 81.45% of identity |
| Eggnog | light sensitive hypocotyls 10(ENOG41119V3) |
| Kegg | Link to kegg annotations (AT2G42610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444945.1) |
| Pfam | Protein of unknown function (DUF640) (PF04852.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |