Id Trinity | FTRINITY_DN56144_c1_g2_i3 |
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Name Transcript | Ll_transcript_225921 |
Sequence | TTATTATTATTATTATTATTATTATTATTATTTCTAAAACGCCGTTGTTATACATTAATTAATTAATTATTTATTTATTTTATTTTGCATTTTCTTCCTC AACCAAACGAAACCCTTCTCTTCCTTTTCTTCCCAATCCAATCCAAAACAGAAAGAAAGAGAAACAAACAAACCCTAACAAAATCGAGAGAGAAAAAAGA GAGTAACGGCCATTGATTGATGAAGTGTGTGACTCGGTGAGTCGAATCGGAGAAAGATCTGAGTTGATTTTGAATCGGTGATGGGTGCTGCGGGTTCAAA ACTCGAGAAGGCTCTTGGCGATCAATTTCCTGAAGGAGAACGTTATTTTGGTCTCGAGAATTTCGGCAACACTTGTTACTGTAACAGCGTTTTGCAGGCA CTATACTTCTGTGTTCCATTTCGCGAACAGTTGCTAGATTATTATGCAAACAACAAAAGTCTGACTGATGCAGAAGAAAATCTTTTGACTTGCTTAGCTG ACTTATTTTCGCAGATAAGTTCCCAGAAGAAAAAAACAGGTGTCATTGCTCCCAAACGATTTGTACAGAGGTTGAAAAAACAGAATGAACTATTCCGTAG CTATATGCACCAGGATGCCCATGAATTCTTGAACTTTTTGTTAAATGAAATTGTCGACATTCTGGAGAAAGAGGACCAGGCTGCAAAAAATGATGAAGAG ACATCACCACCTTCTGAAAAAACTGCAAACGGTCCTAAGAATGGTCTATCTAATGGTGCTAAAAAGGAGCCTTTAGTTACTTGGGTGCACAAAAATTTTC AGGGAATACTCACCAACGAAACAAGGTGCTTGCAATGTGAAACTGTGACAGCTAGGGATGAAACATTTTTTGACTTGAGCCTTGATATTGAACAAAACAG TTCAATTACAAGTTGTTTGAAAAACTTCAGTTCGACTGAGACGTTGAATGCTGAAGACAAATTTTTTTGTGACAAGTGCTGCAGTTTGCAAGAAGCTCAG AAGAGGATGAAGATAAAGAAACCGCCTCACATCTTGGTCATCCATCTTAAGCGGTTTAAGTACATTGAGCAGCTAGGCCGCTACAAGAAGCTGTCTTATC GGGTTGTCTTCCCTCTAGAGCTAAAGTTGAGTGACACTGTTGAAGAAGCAGACATCGAGTATTCTCTATTTGCAGTAGTCGTCCATGTTGGGAGTGGACC CAACCACGGACATTATGTCAGCCTCGTGAAAAGCCATAACCACTGGCTATTTTTTGATGACGAAAATGTCGAGATGATCGACGAGTCCGCTGTTCAGACA TTCTTCGGGTCATCACAAGAATATTCCAGTAACACAGACCATGGTTACATTTTGTTCTATGAGAGCATTGCCAACAGGAACTAGAGGAAGGAACCACCTT ACCAGATTTTCTAGGTACTTGAATCATTTGAACTTAATCTGTTTTCGGTTTATTATTAATTATTTTTCTCTTAACTTTTACCGTTTGAGTTGTTATACAT CCTTGAGAGGATAGATGTTGTGAAAATGTATACCTAGGTGGTTGGCATGTACAGTGGATAGTGGAAAAACTGTCCTTACCCCTCTCCCTATTTCCATAAT AAGAACAGACAGATAGAGCAGTGAGTATATATATGTTCTCAGATTTTCTCTGACAATGTATTCAGTCACAAATGTTCAATCAACATTAGAACTTAACAAC ATTCTATGTTTTCT BLAST |
Tissue | flowers |
Gene name | LI_gene_57688; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_225921
Blastp | Ubiquitin carboxyl-terminal hydrolase 4 from Arabidopsis with 88.56% of identity |
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Blastx | Ubiquitin carboxyl-terminal hydrolase 4 from Arabidopsis with 88.56% of identity |
Eggnog | ubiquitin carboxyl-terminal hydrolase(ENOG410XQ81) |
Kegg | Link to kegg annotations (AT2G22310) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416530.1) |
Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |