| Id Trinity | FTRINITY_DN56144_c1_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_225924 |
| Sequence | CTGGTCCGAGCCGGAAACAGCGACAGTACCCGAACTAGACCAAACATGACCAACACCCGTTCGCATAGATGGTTGGTTTTGTACTAGCTTTTGTAGATGC TAAAAAAAGTTGAAGCCGTCTCTGAAGCAACAAAATTTTGCACGGATATTGTGGAACTCCACTACAGACGCGTCCATAATCACTTATTCATTTAATTTTA AAAAAGCCGTTTTTCTCCATTTTGTATTCCACCAAAGAAACAAACCCTAGCGAAATAGAATAACTGGCATTGAATATTGAACAAGTGTTGTAACTCGCTG AGTTGAATCGGATATAAGATCTGAGTTTGGTTTCATCGAGTTTTGAAGCGGTTATGGGTGCTGCGGGCTCTAAGCTCGAGAAAGCTCTTGGTGATCAATT TCCTGAAGGAGAACGTTACTTTGGCTTCGAGAATTTCGGCAATACTTGTTATTGCAACAGCGTTTTGCAGGCGCTATACTTTTGTGTTCCATTTCGAGAG CAGTTGCTAGAGTATTATGGAAACAACAAAAATATAGCTGATACAGAGGAAAATCTTTTGACTTGCTTAGCTGACTTATTTTCGCAGATAAGTTCCCAGA AGAAAAAAACAGGTGTCATTGCTCCCAAACGATTTGTACAGAGGTTGAGAAAACAGAATGAACTCTTCCGTAGCTATATGCACCAGGATGCCCATGAATT CTTGAACTTTTTGTTAAATGAAATTGTCGACATTTTGGAGAAAGAGGACCAGGCTGCAAAAAATGACGAAGGGACATCACCACCTTCTGAAAAAGTTGCA AATGGGCCTAAGAGTGGTCTAGCTAATGGTGCTAAAAAGGAGCCTTTAGTTACATGGGTGCACAAAAACTTTCAGGGAATACTCACCAATGAGACAAGGT GCCTGCAATGTGAAACAGTGACAGCTAGGGATGAAACATTTTTTGACTTGAGCCTTGATATCGAACAAAACAGTTCAATTACGAGCTGTTTGAAAAACTT CAGTTCGACTGAGACGTTGAATGCCGAAGACAAATTTTTTTGTGACAAGTGTTGCAGGTATATTGCTTTTACTTCTCGAAACTTTTAATTTCAGCTGTTA CTTGGCTTCACAAGTACTACTGTTGAGAAGGTAAAGGACTGGTTCAACCATTTCGAATTGTGTAGCTGAGCTATTCTACTGTTTGTTGAGTGTGATTTTG TGTGTAAATTTTCTCTTGATATTATTAGTTTGCAAGAAGCTCAGAAGAGGATGAAGATAAAGAAACCGCCTCGCATCTTGGTCATCCACCTTAAGCGTTT TAAGTACATTGAGCAGCTGGGACGCTACAAGAAGCTTTCCTATCGGGTTGTCTTCCCCCTCGAGCTGAAATTGAGTGACACCGTCGAAGAAGCAGACATT GAGTATTCCCTATTTGCAGTAGTTGTCCATGTTGGGAGTGGACCCAACCACGGGCACTATGTCAGCCTCGTGAAAAGCCATAACCACTGGCTATTTTTTG ACGACGAAAACGTGGAGATGATTGACGAGTCTGCTGTTCAAACATTCTTCGGGTCATCACAAGAATACTCCAGTAATACAGACCATGGTTACATTTTGTT CTACGAGAGCATTAGCAACAAGAACTAGACAGAGGAACCTTGCAACCTTTTTTTTAGGTAAATTGGATCATTTGAACTTATCCTTCATATCTGTTTTCGG TTAATCATTTAATTATTTTCTTTCTTTGAACACTTTTCCCTTATTCAATCTGTTTAAGTTGATAGACATCATTGAGAGGATTGAGGTTGTGAAAATGTAG GACTTAGGTGGTTGACAATTGACATGTACAGTCACAATAAGAGCAGATAGAGCAGTATATATATGTTGTGACAATTTCACTCACAATGTATTCACAGGCT TCAAAATGTTCATTCAACATTAGAACCTAACATTAACTCATGCTAGTATCTTCTATATTCTGAATTTCTGATTTACTAGAACTTGTTGTGGTTTTAACTG ATCATAAGCACAAAAGTATATGATCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57688; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_225924
| Blastp | Ubiquitin carboxyl-terminal hydrolase 4 from Arabidopsis with 87.18% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase 4 from Arabidopsis with 75.71% of identity |
| Eggnog | ubiquitin carboxyl-terminal hydrolase(ENOG410XQ81) |
| Kegg | Link to kegg annotations (AT2G22310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414346.1) |
| Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |