Id Trinity | FTRINITY_DN56151_c0_g3_i19 |
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Name Transcript | Ll_transcript_226202 |
Sequence | CTCAAAGGCATCGCAGAATTATTGAGACCGTAAATCCCAATTTAGTGAAAGCAAAGAATGTGAAGGCAAAAGATATTGATCTAAGTTGAACTAAAAACTG CATTCTTGATTGTTTTATTTAGTTATCTTATCTATGATTTTGTTTGAGTTATATATATTTTTCTACAGATGGAGAGGAAAACATAACCCTCTAGGTGAGA AAGGATTAGAGAAACAAAAGGCTCATGAACGATATCTGAGGCTGCAGGAGCAAGGGAAAACTGAACAAGCAAAAAAAGATTTAGATCAGAAAAGAAAGAA GCGTGTGGCACTGCAATGGCGAGAAAAGCGGTTTTAATCGGATGCAACTATCCAGGAACAAAGGCAGAATTGAGAGGATGCATAAACGACGTTTGGAAAA TGCACAGCTCTCTCATCAACAGATTCGGTTTTTCTGAAGACGACATCGTCGTTTTGATCGACACCGACGACTCTTACACTCAGCCTACCGGGAAGAACAT CCGTTCTGCGTTGCAAAGGCTGATCCGATCATCGGAGGAAGGTGACGTGCTTTTCGTGCATTACAGCGGACACGGCACGCGCCTCCCTGCGGAAACCGGC GAGGATGATGATACTGGTTATGATGAATGCATTGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGATTTGGTAGATGAGCTCCCTAGAG GTGTTAGACTTACAATTGTATCAGACTCTTGTCATAGTGGTGGTTTGCTTAAAGAAACCAAGGAACAGATTGGAGATAGCACAAAGGGAGCAGAAGACCA AGATTCTGGCTCTGGACTCTCAAACTTTCTGCATCAGAAACTGGAGAATGCCTTCAACTCTCGTGGAATTCATGTCCCTTCTGCGTTGCAGCACCACAGA AGAATTAAACATGACGAAGTTGAAGATAGGGATACTTACCTCCCACATGGTCAACACCACCATGTAAAGAATAAATCTCTGCCACTTTCAACCCTCATTG ATATACTGAAGCAAAAAACTGGGAAAGATGATATAGATGTTGGGAAACTGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_57748; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226202
Blastp | Metacaspase-5 from Arabidopsis with 62.65% of identity |
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Blastx | Metacaspase-4 from Arabidopsis with 61.51% of identity |
Eggnog | Metacaspase(ENOG410Y41C) |
Kegg | Link to kegg annotations (AT1G79330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449305.1) |
Pfam | Caspase domain (PF00656.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |