| Id Trinity | FTRINITY_DN56161_c5_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_227496 |
| Sequence | CTGATCTCATACATACCTCTCCTTCCTCCACAATCCTAAAAAGCAGGAAGTGCCATTTGCTTTTAAAATTTCATGTTGCACAAAAGTGCTTCCACAATGT CGAACAGGAAGCTCTGCATGACCCTCTCCAATTTTCTCAGGCGCACAACTTTATTTCCCCAAAATTCTACCTTAAACCTTTCTTCTCCTCAGATTAAACT TTCATCATCACCCTTCGAAATCCAAATTCCCAATTTTCATAAACCCACGTTCTATGATAATTCTCTTGAGTTTCTCAGATTTTCCGGGGAAAGAAGCTGG TGCTCAAAATCTGCAGAGAAACTGCAAAGTAGTGGTAGTAGGTGTTGGAATTGTGATGCTGTTCCTACTGCATCTGAATCGGCAGCACCATTCCTGTTCT GTGAGTCATGCCAATGTATTCAACCCGTGGATTATTCTATTGACTATTTCCAGATATTTGGCTTGTAAGTTTTTTGGGATTTTAATTTCATTGTTTTGGT TTTCGAACTCTGAAACTTCTGACCTTTATAACAATCCATGTTTTTTCACCTTGACTTGTTATTGGTTAATGATATAGCTGATAGAAATGTTAAGTTTGTA ATTTACAAGGTTATTGTCGATTCTGTCTGTTTTAAGGCACATAGAGATTTTAGTAGTAATTGAAGCTTGATAATTAATAAGTATTACAACAATAACCATA GTCCTCCTGGTGGAGTCGGATACATGAGTCGAGCCAGATCATAATGCCATAATGTAAATCATGCCCATTGACATAAGCATATTATGATACCTACTTATTT CCTAATCATTTCCCCATGGTTTTACTTGGTTTCTCATTGCCTCTACAAATTGGATTAAACTCGAGTTGATCTACTCTCCATACTTGAGCTTTTGATGGTC TCGTTCACATGTGCCCAAGAGGCGTGATCCTAACATCTTTTCAATAATTAATAAGTATTAGCATATTGGTTTTCTCCCTTGCTTCAGTTTCAAACAAAGA TAAAGATTATATGCTTTTATGCTTATGTCTACCCTTCCCACTTCCCACTAAGTGAGATCCTCCTACATTGAGGTGTCCTTTTATGTGTCCATAACTCATA ATTGTGTCCTCTATATATATTCAGAGTATTTCTGGTGCTGTTAGTTATTAGTTTTCTGTTCTTTTTGTTTTTTTATAAGAAGAAAATAGAAGTCTATTGA TTTTTTTGTCTCATAGGTTTGATATCTAAGTTGAGATATAAAACAGGGAGAAGAAGTATGATATAGAAGATAATAATTTGGAGGGTAAGTATAAAGATTG GCAAAAGAAACTGCATCCTGATTTAGTACATTCAAAATCTCAGGTTTGTCTGATGGGATACCCTTTCCTCTTTTTTTAGCATATTCTTGTCTTCTTTCTT CTTTTAATTTTTGCATGGAGGGAAATGGGTAGTTAAGCTGAATGTGTTTCAGAATAAGGTAACAGAGTTTTGTTTTTTTTGAACTACTTCAATTGTTTAG AAAGAAAGAGATTTTGCTGCTGAACAATCTGCAAGGGTGATCGATGCATACCGTACACTTAGAACGCCTCTGTCAAGAGGGATTTATATGCTGAAACTTG ATGGAGTAGAAGTTGATGAGGAACAGACCATTTCGGATCCAGAATTACTAGCTGAGATTATGGATATCAGGGAAGAAGTTGAAGAAGCAACTAACTCTGA GACTTTGAATCACATCCTCTCTCAGATGCAGGAGAAAATGCAAACTTGGTCTACTGCCTTTGCTGATGCTTTTCAAAGTCAGAAATTTGAAGAAGCAAAA ACTTCAATTCAGAGAATGACTTACTATAGTCGTGCTACTCCTGCTAGAGATGAAAGTATGAAACCTGAAAAAGAACGATTGAAGCCAGGGTGAAGACGGA CTTGTACATCTCCAAAGATATCATTTCTGTAGTACTCCTGCCAGCTGAGCTGCAATGCTTTCTCAATAAAATGTATCTCTCTGTCAACTACTGATGATTC ATGGTTTTAAGTTGTGGTTATGGCTTTAGCCGCATTGCATTTATTGCAATTTCGATAAATTGTTGAAAAATGCAACTAACTACGATTGCGATGCAGTTGT GGAGGCTCCAAAACCATAATATTGGACCGCAAATGCCGTTGATATATTCTTTCCATAGTTTACTTACCTCGTAAATGGGATAAGATAGTCCATTTTACTA ACCAAAAATATCTTTAGCCCCTACTTGTAGGGTTGCCTCTAATTCCTTTATTTCATATTATTATTGATTTTATTACTGTAGGCTTTCAAATATGGGTCTA TTCCCTTTTGGAGCAAATAATAGATCAGTATGAAACATTTGAACGAGACACTTCTCCCATTGAAGTAGCCTATCAATTGTCAATGGAATCAATGCTCCTT TATGAACATGGGTATACATTTTGTCATGACATCATAAGCACGATCACCCTTCAGATCGTCTACATGAAACTAAGAACACTGTTTTATTCCTGGAAATAGT TATTGTGTAGTGTTTTTCTCAACCAAGAGTTGAAGGCTATGGGAAATTTGCTACACTTGTTTTGAATTTTAATAAAGGTGTTTGTTTTGGTAAAGGTGTT TGTGGAACTAAATACTTGATCAAGCTAGTCTATTTTAAACATACAAGCTTACACTCGAAGTTGAACTCGACTTGTTTAAATGAGCTTAGCTCCGGCACTA TAAACTCAACATTAAAAACGCTCGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_57841; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_227496
| Blastp | Iron-sulfur cluster co-chaperone protein HscB, mitochondrial from Homo with 34.15% of identity |
|---|---|
| Blastx | Iron-sulfur cluster co-chaperone protein HscB, mitochondrial from Homo with 40% of identity |
| Eggnog | protein oligomerization(COG1076) |
| Kegg | Link to kegg annotations (150274) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443103.1) |
| Pfam | HSCB C-terminal oligomerisation domain (PF07743.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |