Ll_transcript_226340

• Id Trinity: FTRINITY_DN56164_c4_g1_i3
• Name Transcript: Ll_transcript_226340
• Sequence: CTAAACCCTTTTGCTGTTGTGTTGAAAGTGCAAAACCCTTTTCCCTTTGCATCCACACAACACACATACATGGGAACAGTGTTGCGCTGCTAAGACCTGA GGGAACAGTGTGGTTGTTTGTGTCTTCATGGCGGCTCCTTTTCTTCTTCGTTCTCTCTTCTCCTCTTCTCGAAAATCCTCTCCCACTTCTTCTCTCACTC CATCTCGCTTCTTCTCTAAACTCAACCACTTCTCACGCGCTTTCTCCTCCGCCGCTTCCGCCGCCACCGCTCCCACCTCTTCCGCTGCAACCCTAGACCC CAGCCACCTCCGAAACGTGGCGGTTATCGCTCATGTCGACCACGGCAAGACTACTCTCATGGATCGGCTGCTTCGTCAATGCGGCGCCGATATCCCTCAC GAACGAGCGATGGATTCAATCTCCCTTGAACGGGAGCGTGGAATCACTATTTCTTCGAAGGTTACATCCATTACTTGGAAAGAAAATGAGCTGAACATGG TTGATACTCCTGGACATGCTGATTTTGGTGGTGAAGTTGAACGTGTTGTTGGCATGGTTGAGGGAGCAATTTTGGTTGTTGATGCTGGTGAAGGTCCACT TGCGCAAACAAAATTTGTCCTTGCAAAAGCCTTAAAGTATGGATTGCGGCCTATTCTTCTCATGAACAAAGTAGATCGACCTTCAGTTACTGTGGAGACA TGTAATGAAGTTGAGAGTTTAGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTCTTTATGCTTCTGCTAAAGAAG GATGGGCATCCACCACCTTTACCAAGGATCCTCCGGCTGAGGCCAAAAATATGTCACAGTTACTTGATGTCATTGTTTCACATGTCCTACCTCCAAACGC AAGCATCGATGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGAGACTTCTATCTTGGGCGGATTTTGACTGGACGCGTATATTCTGGGGTTGTTCGT ATTGGTGACAGGGTTCATGGACTACGTAATAATGATTCTGTTGCTGAAAAGATTGAAGACGGAAAGGTGGTGAAAGTCATGAAAAAGAAGGGAACGATCA TGGTCCCAGTTGATTGTGCTGGAGCTGGTGATATAATTTCAATTGCTGGCTTGGCAACTCCATCAATAGGCCATACAGTAGCCACTGTGGAGGTCATGTC TGTATTGCCCACAGTTGTATTGGATCCTCCAACAATCTCCATGACTTTTGGAGTAAATGACTCTCCATTGGCTGGTCGTGATGGCACTCATTTGACTGGA GGAAGAATTGGTGACCGACTGATGGCTGAAGCTGAAACAAATCTTGCCATAAATGTACTTCCAGGCATATCAGAATCATTTGAAGTTCAGGGAAGAGGAG AGCTACAACTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCCGTATCGCCACCTAAAGTCATGTATAAAACTGAAAATGGTCAGAA ACTTGAGCCAGTAGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAGGCATTGTCTCATAGGCGAGCTGAGGTTACTGATATG GGTCCTGTCTCAGGAACAGTTGGTCGGACCAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGTTACAGGAGTGTGTTCAGCACTGACACACGTG GAACTGGATTTATGCATTGTGCTTTCTCCGCATATGAAAAATATCGAGGCGCTCTTGGCAATGTTAGGAAAGGAGTGCTGGTTTCAATGGGTTATGGTAC AATCACAGCTCATGCATTGATGAGCTTAGAAGCTCGTGGAACCCTTTTCGTATCACCTGGAATGGAGACATACGATGGAATGATTGTAGGAGAACACTCA AAGGATACAGATCTTGATGTCAATCCTGTGAGAGCTAAAGCACTTACAAATGTGCGTGCTGCTTCCAAGGATGAGAATGTGAAGCTGACTCCCCCTCGCC TTATAACACTTGAAGAAGCTATCGGGTATGTAGCTTCGGATGAGCTTATTGAGGTTACACCTAAGTCCATCCGGTTACGGAAGAAATACCTTGATGTTAA CAAACGTAAGACCATGAGTAGAAGACCAAGGGAATGAGGAGTTTGGCTGGACTGAATTTTGTAAGAATAATTTATTTAGTGTACGGTATAGCCATTACAA CCATTTTATATATTAATTCTAGCAGGTATTACATGCACTGCAAAAAGAAATATTCATTGGTAGTGATAAGGTAGCTCAATTTTGTATTTCCAGCAATGGT TAATAATTGGCAATGGGACAAGTTTCTCATTGTTATGTAATATTCCTGAAACCTTTGTTTCAAAGATTAAGCTGTAAAAGTATGAAATAGTCAGAAAGGG GATTTTATTTGCTCAAGTTAATGGTTTAGTTGACATTTTCCACGTCCTTTGTTGTGATGTTTGATGCCCTGGATTTGATATCATTTCATTTCACTTTTTC TTAATCCCATG
• Tissue: flowers
• Gene name: LI_gene_57880;
• Additional information: details;

Expression of Ll_transcript_226340

FPKM

• FPAB: 12.6
• FPNAB: 21.3
• LF1: 12.2
• LF2: 7.9
• LF3: 7.9
• LF4: 17.3
• UF1: 11.3
• UF2: 8.6
• UF3: 11.7
• UF4: 13.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_226340

• Blastp: GTP-binding protein TypA/BipA homolog from Helicobacter with 46.04% of identity
• Blastx: GTP-binding protein TypA/BipA homolog from Helicobacter with 45.66% of identity
• Eggnog: gtp-binding protein typa(COG1217)
• Kegg: Link to kegg annotations (C694_02460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413804.1)
• Pfam: Elongation factor Tu GTP binding domain (PF00009.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;