| Id Trinity | FTRINITY_DN56164_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_226342 |
| Sequence | TGCTCACAATGAGGATGCAGTGACCTAACGTCTTGTTGGAAGTTGCTAAACCCTTTGAATGTGTTGAAATGCTAAACCATTTTCCTTTGCAACTTGCATT CACAACACTTGAACAATGACCTGACCTCAGTGAATAACAACTTTTCATACAACACAGTGGCTCATGGCGGGTCCTCTTCTTCTTCGTTCTCTCTGGTCCT CTACTACAAAATCCTCTCCTTCTCCCTCTTCTCCTTTCATTTCTAAACTCAACTACTTCTCACGCGCCTTCTCCTCCGCCTCCCCTGCCGCCGCACCTCC CGTCCCCTCCTCCCTCAACCCTAGCCACCTCCGAAACGTCGCCGTTATCGCTCATGTCGACCACGGTAAGACCACTCTCATGGATCGCCTCCTCCGCCAG TGCGGCGCCGATATCCCTCATGAACGCGCCATGGATTCAATCTCCCTTGAACGCGAGCGCGGTATCACTATTGCTTCCAAGGTTACATCCATTTCTTGGA AAGAATATGAGCTGAATATGGTTGATACTCCCGGGCACGCTGATTTTGGCGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGT TGATGCTGGTGAAGGTCCACTTGCGCAAACAAAATTTGTCCTTGCAAAGGCCTTAAAATATGGATTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGA CCTTCAGTCACCGAGGAAACGTGTAATGAAGTTGAGAGTTTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTC TTTATGCTTCTGCTAAAGATGGGTGGGCATCCACCACTTTTACTAAGGGTCCTCCTGATCAGGCCAAAAATATGTCACAGTTGCTTGATGCCATTGTTAC ACATGTCCTACCACCAAATGCAAGAATTGACGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTTGGGCGAATTTTGACTGGACGC ATATATTCTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGTAATAACGACTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGA TGAAAAAGAAGGGTATAAACATGGTTCCAATTGATTGTGCTGGAGGTGGTGATATTGTGTCAATTGCTGGCTTGACAAGCCCATCAATAGGCCATACAGT AGCCACTGTGGAGGCTATGTCTGTATTGCCCACAGTTGTATTGGATCCTCCAACAATTTCTATGACCTTTGGAGTAAATGACTCCCCATTGGCTGGTCGT GATGGCACTCATTTGACTGGAGGAAGAATTGGTGACCGGCTTATGGCTGAAGCTGAAACAAACCTTGCCATCAATGTATTGCCAGGCTTATCAGAATCGT TTGAAGTTCAGGGAAGAGGAGAGCTCCAGCTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCTGTCTCCCCACCTAAAGTCATGTA TAAAACTGAAAATGGTCAAAAGCTTGAGCCAGTTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAAGCCTTGTCTCATAGG CGAGCTGAAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGGGACTAGTTGGTTATAGGAGTG TGTTTAGCACTGATACGCGTGGAACTGGATTTATGCATTGTGCTTTCTTCGCATATGAAAAATTCCGAGGCCGTCTTGGCAATGTTAGGAAAGGCGTACT GGTGTCAATGGGTTATGGTACAGTCACAGCTCATGCATTGATGAGCTTAGAAGCTCGTGGGACTCTTTTTGTATCACCTGGAATGGAGGCATATGATGGA ATGATTGTAGGAGAACACTCAAAGGATACAGATCTTGATGTCAATCCTGTGAGAGCTAAAGCACTTACAAATATCCGTTCTGCTTTCAAGGATGAGAATG TGAAGCTGACTCCTCCTCGCCTTATGACACTTGAAGAAGCTATTGGGTACGTAGCTTCCGATGAGCTTATTGAGGTTAGTTCACCTATGATTTGTGATTG TCATAAAAAAGTTTTTCCTCATGTTTGATGAAGAAAATGTCAATTGTGCTTCCCCGGATCCCCCTCCTCCACCCCTGCCCAATACTGAATAAAATTTTAT CTATATTTTCCCTTTTTTATTTGTCCATTTAACATACATCTCACACTGCATTGATAGTGCTTATACCTGGCTTATTTATCTGATGTTCACCTGGCCACAA CTATATTTCTTGGTTGTTTTCACCATGACATTTCTCCTATTCTTTCTTTTGTTTCTGAGAAGGTTACACCGAAGTCCATCCGGTTACGGAAGAAATACCT TGATGTTAACAAGCGCAAGACCATGAGTAAAAAACCAAGGGAGTGAGGAGATTTGCTCAACCAGATTTTGTAACAATAACTTATTTACATGGTATAGTCA TTACAACCATTTCTTCCTCCTCATAAACATTTTATACGTGAGTTGAAGTAATGTATTACATGTACTGCAGAAAGAAATATTCTTTGGTAGTGATAAGATA GCTCAATTTTGTATTTCTATGAAATGATTAATAATTGGCATAGGAACAAGTTGCTCATTATTATGTAATATCATAAAACGTTTGTTTCATAGATTAAGCT ATAAAAGTTTGGAATAGTCAGAAAGGGGATTTTATTTGCTCAAGTTAATGGTTTAGTTGACATTTTCCACGTCCTTTGTTGTGATGTTTGATGCCCTGGA TTTGATATCATTTCATTTCACTTTTTCTTAATCCCATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57880; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226342
| Blastp | GTP-binding protein TypA/BipA homolog from Helicobacter with 45.51% of identity |
|---|---|
| Blastx | GTP-binding protein TypA/BipA homolog from Helicobacter with 45.42% of identity |
| Eggnog | gtp-binding protein typa(COG1217) |
| Kegg | Link to kegg annotations (C694_02460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453688.1) |
| Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |