Ll_transcript_226343

• Id Trinity: FTRINITY_DN56164_c4_g1_i6
• Name Transcript: Ll_transcript_226343
• Sequence: TGCTCACAATGAGGATGCAGTGACCTAACGTCTTGTTGGAAGTTGCTAAACCCTTTGAATGTGTTGAAATGCTAAACCATTTTCCTTTGCAACTTGCATT CACAACACTTGAACAATGACCTGACCTCAGTGAATAACAACTTTTCATACAACACAGTGGCTCATGGCGGGTCCTCTTCTTCTTCGTTCTCTCTGGTCCT CTACTACAAAATCCTCTCCTTCTCCCTCTTCTCCTTTCATTTCTAAACTCAACTACTTCTCACGCGCCTTCTCCTCCGCCTCCCCTGCCGCCGCACCTCC CGTCCCCTCCTCCCTCAACCCTAGCCACCTCCGAAACGTCGCCGTTATCGCTCATGTCGACCACGGTAAGACCACTCTCATGGATCGCCTCCTCCGCCAG TGCGGCGCCGATATCCCTCATGAACGCGCCATGGATTCAATCTCCCTTGAACGCGAGCGCGGTATCACTATTGCTTCCAAGGTTACATCCATTTCTTGGA AAGAATATGAGCTGAATATGGTTGATACTCCCGGGCACGCTGATTTTGGCGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGT TGATGCTGGTGAAGGTCCACTTGCGCAAACAAAATTTGTCCTTGCAAAGGCCTTAAAATATGGATTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGA CCTTCAGTCACCGAGGAAACGTGTAATGAAGTTGAGAGTTTGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAACAACTAGACTTCCCAGTTC TTTATGCTTCTGCTAAAGATGGGTGGGCATCCACCACTTTTACTAAGGGTCCTCCTGATCAGGCCAAAAATATGTCACAGTTGCTTGATGCCATTGTTAC ACATGTCCTACCACCAAATGCAAGAATTGACGCTCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTTGGGCGAATTTTGACTGGACGC ATATATTCTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGTAATAACGACTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGA TGAAAAAGAAGGGTATAAACATGGTTCCAATTGATTGTGCTGGAGGTGGTGATATTGTGTCAATTGCTGGCTTGACAAGCCCATCAATAGGCCATACAGT AGCCACTGTGGAGGCTATGTCTGTATTGCCCACAGTTGTATTGGATCCTCCAACAATTTCTATGACCTTTGGAGTAAATGACTCCCCATTGGCTGGTCGT GATGGCACTCATTTGACTGGAGGAAGAATTGGTGACCGGCTTATGGCTGAAGCTGAAACAAACCTTGCCATCAATGTATTGCCAGGCTTATCAGAATCGT TTGAAGTTCAGGGAAGAGGAGAGCTCCAGCTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCTGTCTCCCCACCTAAAGTCATGTA TAAAACTGAAAATGGTCAAAAGCTTGAGCCAGTTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAAGCCTTGTCTCATAGG CGAGCTGAAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGTTAGCCCAGTTGTCTGTTTTGA ATTTATCTTCGATTAGTTTTTATCCCTGCACATAAATGATCTCTCTAGATCTCTCTCTCTCTCTATATATATATATATTTATATATAAACACTATAGATG CACATGGTTTTGTCAAAACCACATTTTTAGATCCTTTGTTTTTTCTTGTTGTTATCATTTCCCCTTCCTTAGGGATGGTGATAACCTCTTGCCATCCCAA TGGCTTCCTTTAAGAACCTTGCTCTAAGTCTGGGATGATCGGAAAAGAAGAAAAGGTGAGGAATCTCTGAGTAAGTGCCTTTTCAATAATTGAACGCCAG TTAAATATTTTAATGTAGATTTTAGATAATTTTTTCTCTTGGGGTAGCTCCTATTATAGAATATATCGTAGAATCTCATCTTAGGTTGTTGGGGTATGTG TCGAGGAAACTGATGGAAACCCCACTAAGAAGAGTAGATCAAATGAAGGTTTCACAAAAAAACCATGGGTGAAACAATCAAGAAGGATTTGGAGATCAAA TGGGTTGTTGTTTTTTGTAAACTTGTAATGTTATCGAAACCAGTAGACTTATGTTACTTATTCAGAGTCCAAATTTCTGGTTGCCTCCCTAGTCTAGCTG AATTACTGCCCATAGATCTACTGGAGTAATTTTATCTTCTGGAATTTAGTTCATGTCTCCCATCATTAGAGATATAACTTTTCTGGCAATACAGTTTTAG TGAAATCAAATTATATTCAGTGTTCGAGAAACCTACTAAGTAACGTCTTTAATACTGTTTGTTCAGGGGACTAGTTGGTTATAGGAGTGTGTTTAGCACT GATACGCGTGGAACTGGATTTATGCATTGTGCTTTCTTCGCATATGAAAAATTCCGAGGCCGTCTTGGCAATGTTAGGAAAGGCGTACTGGTGTCAATGG GTTATGGTACAGTCACAGCTCATGCATTGATGAGCTTAGAAGCTCGTGGGACTCTTTTTGTATCACCTGGAATGGAGGCATATGATGGAATGATTGTAGG AGAACACTCAAAGGATACAGATCTTGATGTCAATCCTGTGAGAGCTAAAGCACTTACAAATATCCGTTCTGCTTTCAAGGATGAGAATGTGAAGCTGACT CCTCCTCGCCTTATGACACTTGAAGAAGCTATTGGGTACGTAGCTTCCGATGAGCTTATTGAGGTTACACCGAAGTCCATCCGGTTACGGAAGAAATACC TTGATGTTAACAAGCGCAAGACCATGAGTAAAAAACCAAGGGAGTGAGGAGATTTGCTCAACCAGATTTTGTAACAATAACTTATTTACATGGTATAGTC ATTACAACCATTTCTTCCTCCTCATAAACATTTTATACGTGAGTTGAAGTAATGTATTACATGTACTGCAGAAAGAAATATTCTTTGGTAGTGATAAGAT AGCTCAATTTTGTATTTCTATGAAATGATTAATAATTGGCATAGGAACAAGTTGCTCATTATTATGTAATATCATAAAACGTTTGTTTCATAGATTAAGC TATAAAAGTTTGGAATAGTCAGAAAGGGGATTTTATTTGCTCAAGTTAATGGTTTAGTTGACATTTTCCACGTCCTTTGTTGTGATGTTTGATGCCCTGG ATTTGATATCATTTCATTTCACTTTTTCTTAATCCCATG
• Tissue: flowers
• Gene name: LI_gene_57880;
• Additional information: details;

Expression of Ll_transcript_226343

FPKM

• FPAB: 0.1
• FPNAB: 0.1
• LF1: 0.3
• LF2: 0.2
• LF3: 0.4
• LF4: 0.2
• UF1: 0.2
• UF2: 0.2
• UF3: 0.2
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_226343

• Blastp: GTP-binding protein TypA/BipA homolog from Haemophilus with 47.32% of identity
• Blastx: GTP-binding protein TypA/BipA homolog from Haemophilus with 48.25% of identity
• Eggnog: gtp-binding protein typa(COG1217)
• Kegg: Link to kegg annotations (HI0864)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453688.1)
• Pfam: Elongation factor Tu GTP binding domain (PF00009.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;