| Id Trinity | FTRINITY_DN56174_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_226748 |
| Sequence | AAAAAATAAGCAAAAACATCCATCGGAAACCACACCATGGCTATGCAACTGAAACCCTTTACCCTTCGCCTCGGACAAAGTCAACCTCGAAACCTTAATT TTCCGAACAAACATCAAATAGTCACACGTTGCTCTCTTCGCGATTCAGTATCTAACACTCACAATCACAAACTTGTTCACCAATTCAATCCTAAGATTCC TATAGAGGAAGCGGTTACGCCACCCACATCATGGTACACAGACCCTTCTTTCTTTCACCTTGAACTCCATCGCATCTTCTACACAGGATGGCAAGTCGTG GGTTCCACATAAGAAGAGTAGCCAACAAGTATTTAAATAATCCGAGACAATGAGCTTTGGGATGTGAGCTTAGGGTTAACTTTGACCCATAACTAAAGGC CATTTCAACACAACCGGAAAAAAGTTGGGCAAGAAGTTGGACTCTGGTATTTAAACCATTCGTGAGACAATGAGGTTTCTTGTGGATGTGAATTTGAATA CAACACAATCGTAATTAGCTTCATTGATAGAGAATTTTTTTTTTCTTTTTTTACTTATGAGTTATGATGTATGCTGGAATGTTGAAAACTGAAATATCTT TGCATTAATGAAAGATGATGACTTTGTAATATGAATTTAAGTGGATATGGGTGTTTCTGGTTCATTAGATTTGATTGGAGGGGCGAATAACATGGGATTT GTATTTTGTGCTTTATGTGAAGTGCAAACAAAGCTAGGGAGTGACACTGGGTTGGCTTCTAAACATTGCTAAGTGTTATTCTGCATTATCTATATGGGAT TTTTCGTCACCCAAAAATTCTCAATTTTCTCTGAATTTTGCTTACCAGGATCCACAGAGCAGATAAAGGATGCCCTTGACTTTTTCACTGGAAGGTCAAC TTTTTGAATAATTAATATTTGCTCTATTAAATAAAATTAAATCAAGTCTAGTCCATTTGATTTTTGGAAATGAGAAAGGATATTTAGGAGTGTCTTATTA AGTTGTGCACTTTATTCATTTTGTTTACTTTCAAGTTTCTGAGCACCAGTTGAAGGATTAAATATTGCAGACTAGGAGATGTGGAATTTGTGGTATGCCG AGATGAGAGTGGGAAGGTTCGTGCCTTTCACAATGTCTGCCGTCATCATGCCTCTCTTCTTGCTTCTGGAAGTGGACAGAAATCGTGCTTTGTATGTCCT TACCATGGGTGGACATATGGTTTAAATGGAGCACTTCTTAAGGCAAATAGGATATCAGGAATGCGGGATTTCAATGTTAAAGATTTTGGGCTTATACCAA TCAAGGTAGCTACCTGGGGGCCTTTTGTTCTTGTCAATCTTGAAAAGGAGAGTCTTTCCCAGAATGAAGTTGATAGTCACAATGTTGCAAGCGAATGGCT TGGTAGCTGTTCAGAAATACTGAGTACCAATGGAGTTGATTCTTCACTAAGTTATGTTTGTAGACGTGAATACACTATTGAATGCAATTGGAAGGTATTC TGTGATAACTACTTAGATGGTGGCTATCATGTGCCATATGCACATAAAGGCCTAGCATCTGGTCTTAAGCTTGATTCCTATTCTATCTCAATGTTTGAAA GGGTTAGCATCCAAAGTTGTGAAAGCAACTCCGGGAAGAGCGAAGAAAATTATGACCGACTTGGAAGAAAGGCTATATATGCTTTTATTTATCCAAACTT CATGATTAATAGGTATGGACCTTGGATGGACACCAATCTCGTACTTCCACTAGGACCCAACAAATGTCAAGTAGTATTTGACTACTATCTTGATCATTCT CTAAAGGTAATTTGTAGTTAAGTAAGGACATACCTAATACTTGTAACATGATTCAAGGTGATCATTCTATCCATGATTCAGTGTGTCTGCTACTAGAGTT GCCTGGTGCTAACTTGCTAATTCTATAGGTTCTGGGGGATGAACACTGATGGTTATACCGTTATACAAAGATATGTTGTGATTTCCTGCATGGGTCTTTA TTCTGGAAAAAAATTGTTGACATTTTTTTGTCAACGGGACAATTTTTTGGGGAGATGCATAATAATTAGATCCTGCTCAATTCAGCATCAAAATTATTAT TTCAATTATTATAATGAATCTTTTAAAAGGGCAGCCTGGTGCGCAAGGCTCCCATCACGAGCGAAGAGGTTGTTTTGCTCACTGTATATTTAGGGATTAA ATTTGGAAGAAACATAGGGAACAAGAAACTTAGAATTACCCCTAGTTGATGACTAGGTTATCGAATGTTAAGAAATGAAAATTTCCGAGATTTACTTTCA TATTTTGAATGACTCCGTCCAAACACAGCTTTCTTGCTTTGATGGATTCTGTGTAGAAGACAGTGAAGCCATAAGGTCAAGTTATGCCAAGCATACTGCA TTATCAGATTTTTCAGAAATTTAACCAGGATTGACATGCCCATTTCAATATCTATGTAGTTCCTCATAGATATGAGCCTTTTCTGTTCTCTTAAATGAGT TTAAATTCTATGTATCATAGGTTAGAGCATACTTTCAATTTAAAGAATTAACTGCTACAGCCTTTTGTTTGTCTAAGCAGGATGACAAAGATTACATTGA GAATAGTTTACAAGATAGTGAAATCGTGCAGGTACAAACATTAATTTCGTAGATTTGGCTAGAAATTCCCGGAGTAATTTATCTGTCGTTCATTTGCAGA TGGAAGATATTGTGCTGTGTGAAGGTGTCCAGAAGGGCCTTCAGTCCCCAGCATATTGTGTGGGGAGATATGCTCCTAGAGTTGAGCAGGCCATGCACCA TTTTCATTGTCTGCTTTATGAAAACCTTACAAAATAATTTCCCTTCATTACACTACTACATATGCTAAAGGCTATAGTAAATTACTGCACCAATTAATAC TTGCTCTGGGCTTTTGTCTGAATTTGAAATTGATACACATCTTGTCTCATTAGCAATAATAGTTGCATTATGGATATGTTGCTGAACATGTTAGTTTTAA AATACTGAGCATCATTGTGGCTGATTCTCAATAATTCATATCTGCCATTGTAATTACACCATTGGATGTAAATATGCAATTGTCTGAACTTATGTTGATT CACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_57959; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226748
| Blastp | Choline monooxygenase, chloroplastic from Arabidopsis with 65.03% of identity |
|---|---|
| Blastx | Choline monooxygenase, chloroplastic from Arabidopsis with 68.02% of identity |
| Eggnog | rieske 2fe-2S domain-containing protein(COG4638) |
| Kegg | Link to kegg annotations (AT4G29890) |
| CantataDB | Link to cantataDB annotations (CNT0000705) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463425.1) |
| Pfam | Ring hydroxylating alpha subunit (catalytic domain) (PF00848.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |