Ll_transcript_226680

• Id Trinity: FTRINITY_DN56186_c0_g2_i1
• Name Transcript: Ll_transcript_226680
• Sequence: CCTTAAACCATCACCTTTTAACTTTTGTTGTTTTGCTCATAAAGTGAAACAATCAGAATGTCTCCAAAAAGTGTAGTTCTTTCAGTTTTCATCTTGTTCC TCTCATTTGGTTTATGCTTTGGCTTTTACATAGAGGACAAATACAATGAAACAAATTATAAATATTACACTGGACCTAGAAGGTTGATGAAGCAACAACA TGAACACTTCATGAGAAGGACTCGTAGGTCTAAAGGAAGGGTTAATGTTGATGACTATGGAGCAATAGCTAATGATGGAAGAGATGATACTGAGGCATTT GAGAAGGCATGGAATGAAGCATGTTCAAGAGGGTATATTCTTGTGGTACCTGAAAAGTGTGTATATTATTTGAAGCCTATAACATTTTCAGGTCCATGCC AACCAAACACAGCATTTAAGGTCTATGGAACAATCAAAGCATGGCCTCATATGTCAGCATACGAAAAAGATAGACGGCTATGGATTATGTTCGATAACGT ATTGAATCTCGTAGTCGATGGTGGCGGTATCATCGATGGTAATGGTTGGAAATGGTGGCAGAACTCCTGCAAAGTTAACAAAAGCCTTCCATGCAAAGAT GCACCAACTGCTGTGACTTTCTCTCAATGCAACAACTTGAAAGTGGTAAACCTGAATTTCAAAAATGCACAGCAAATGCATGTTAGGTTCCAAAGATGTT TCAATGTTACAGCATCAAATTTAGTTGTCACAGCACCAGGGAACAGCCCTAACACTGATGGAATTCATGTTACTGAAACACAAACTATGGTCATTAGCAA CAGTGTCATTGGTACAGGTGATGACTGTATTTCAATAGTAAGTGGATCCAATAACATTCGTGTCACAAATGTCATTTGCGGACCAGGACATGGAATCAGT ATTGGAAGCTTAGGAGCTGGTAACTCAGAAGCTGAAGTCTCAGATGTGGTAGTGAACAGAGCCATTTTAAAAGGAACAACTAATGGAGTTAGAATAAAGA CTTGGCAGGGAGGTTATGGCTATGCAAAAAACATCAAATTTATGAACATAGTAATGCGAAATGTGACCAATCCCATAATTATAGATCAAAACTACTGTGA TCAGAAAGAGCCATGCCCAGAGCAGGAGTCAGCAGTACAATTGAGCAATGTGGTGTACCAAAACATCAGAGGAACAAGTGCCTCAGAAGTGGCAATCAAA TTTGAGTGCAGCAAAACAGTTCGTTGCAGAGAAATTTACTTGCAAGATGTGATTTTAACACCTGAAGACGGCGGCGACACCGGCACCGTTGCTGCATGTG AGAATGTTGTGTATGCCAACAGAGGAAAACTGCACCCTCAGTGCTCTTTTTCTTGATCACAGAAGTAAGAATGAAGTTATGAGTATCTGTAAATACTTAA CCAATTATTCAAAACTTGGCACAATGGCATATTTATGCTATTAGTCTAAATTTATTTGTTCTCATCATTTAAATTACTACGGATTATCGACTTCTTTGAA ATCTTGTAATAATAATATAAAATTTGATCAAATGCAAACTATGTAACTATCCTCCAAATAAATTTGAAAACACCACAAATTCAATAATTTCAACATATAG TTGAGTGAATATTTTGTGTTGTTTTTTTATTCATGGCGATCAAA
• Tissue: flowers
• Gene name: LI_gene_58049;
• Additional information: details;

Expression of Ll_transcript_226680

FPKM

• FPAB: 39.5
• FPNAB: 0.2
• LF1: 0.3
• LF2: 0.3
• LF3: 0.2
• LF4: 0.6
• UF1: 0.4
• UF2: 0.4
• UF3: 0.3
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_226680

• Blastp: Polygalacturonase from Actinidia with 61.62% of identity
• Blastx: Polygalacturonase from Actinidia with 61.62% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436071.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;