| Id Trinity | FTRINITY_DN56193_c2_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_226022 |
| Sequence | AAAAGAACCAAAGCTGCAGGAGCATGTGTCTTAGTGCCCAAGTAACACGTATTATATAAGGATATCCTTTACATTTCGAAAATCAAAATCATTCCCCTAA TCTGTTTTCACTCCTTCTTCAATTAATCAATCAAATCCTCAATTCCTCTGAATTTGAATCTCATGGGTACATCACAGAGCCGTGAAGGCCTCGAAGTCAC CGACTCCGATTCCGATTACGAAGAAGAACAAGAACACTGCGAAGACGCCCAAACTAACACCGTTTCCAAACCTCAACTCGATGATATCGACGCAAAACTC AAAGCTCTTAAACTCAAATACTCCAATTCCCAAACTACCCCTCTTCCCGTTAACGCCGTCAAGCTTTACCTCCACATCGGTGGTAACGCTCCTAACGCCA AGTGGATCCTCTCTGATAAACACACTTCCTACGCTTTCGTCAAAAACGACGACGATGGAGACCAAAACGACGACGATGAAACCGATTCGTTTTACGTTCT CAAGGTTGGGTCCAAGGTTCGTGCTAGGGTTTCAACCGAGATGCAATTGAAGATGTTTGGGGATCAACGTCGCGTTGATTTCGTCTCCAATGGCGTATGG GCTCTCAAGTTCCCCACTGATGAAGCGTATCGGAAATTCATCACTGAATTTCAGGATTGCATTTTCGAGAACGTGTATAATCTCGAAGCTACTGAAGAGA ACAAGGTTAAGATTTATGGCAAGGAGTTTATCGGATGGGTGAAGCCTGAAGCTGCTGATGATTCAATGTGGGAAGATGCTGATGATTTTTCATCGGAAAA GGCGAAGACGCCAGTTAGGGATAGGGAGAATTTGATGGAGGAATTTGAGGAAGCAGCGAATGGAGGGGTTCATAGTTTGAGTTTAGGTGCTCTTGATAAC AGTTTTTTGGTAAATGACACTGGTGTTCATGTGTACCGGAATTTCGAACGTGGTATTCATGGGAAGGGTGTTGCTGTGAAATTCAATAGTGGGGATGGGA AGTTTTCGGATTTGGGAGAACATACTCCGAATAAGGCGCTGTTGATGAGGGCAGAGACGAATATGATGCTTATGAGTCCAATGAATGAAGGGAAGCCACA TGGTTCAAAGCTTCACCAGCTCGATATTGAGACTGGGAAGATTGTGAGTGAATGGAAGTTTGAGAAGGATGGTGTTGATGTTATGATGAGGGATATTACA AATGATACCAAAGGATCGCAGTTGGATCCTTCCGAATCGACATTTTTGGGGTTGGACGATAATAGGCTTTGTCAATGGGATATGAGGGAGAGGAAAGGAA TGGTTCAGAGTCTGGCGATGGCGAATTCACCTGTGTTGCACTGGACCCAAGGGCATCAATTTTCAAGAGGGACTAATTTTCAGTGCTTTGCTACTACTGG AGATGGTTCAATTGTAGTTGGTTCGCTTGATGGCAAGATAAGGCTGTATTCGAAGACATCGATGAGACAAGCTAAGACTGCTTTCCCGGGACTTGGTTCC CCGATTACCCATGTTGATGTTACTTATGATGGGAAATGGGTGTTGGGCACCACTGATACTTATTTGGTACTGATTTGTACCTTGTTTACTGATAAAGACG GAAAAACAAAGACTGGATTTAGTGGTCGTATGGGAAACAGGATTCCTGCTCCCAGGCTGCTGAAGTTGACTCCTCTGGATTCACATTTGGCTGGCGCAAA CAATAAATTTCATGGTGGCCATTTTTCATGGGTAATCAATTTTTTCCATTATTGTTAGACTTACATTCCTCTATATTTATTTATAGTATGACCTTAGAAC AGATTCATGTTGAATCTTTCATATGACTACTTATATATGTCAAGCTTTGTGTCATCTTCAACTACAACATACTTTATTAATTGCCTTTGATTGATTTTTG TTAATCTAGCTTTTTTGTTGTATCTTCTTATTATGGAAAACCTTTTGTTCATACTTCATACCTACATAATTCGTCGGTCGCAATTGTGCTTGCGATGTGG AGATCCTGAAATCCATAATGCCATGGCTTCCATTGCAGTTTTCGACTGCATTTTAAAACCTCACTACTGCAAATTTTGTTTGGCCTTTTTCTTGTTATGA GGCTATTGTTTCTTGTAGTACTATAGGTTTCTTACCATAAGAATGGAATTGCAACAGCTTGATTTTAGAGAGTTTTATCGTATTAGCCATTTCCGTGTTA TGTCTTTCGTTGAAAGAAATTAGGTAAACTTTTCGCATAAAGGTTTGATCGGTGTACGGAAACTCTTAACAGAAATACCATCAATTAGTAGAAATAAATT TAGTCTGTGCCTACATGCCTCCTCTGGATCAACTATTTTATTGAACACTTTCCTTTACTTCTATTTATGAAGCTGTATACTTCGGATTTAGCTATTGATG AAAGATGATAACGTAGAGTTATTGTGATCCATAATAGAACATTTTTTGAACCAAATTGTCACAGAAGTGGTCTGGTGGTACAAGACATTCAAGTGGTAGA TTGAACAAAGATTGGTGAGTTGAATTGTTGAAATGATAACAGGTCCTTGGGTAGATTAGTAATGGAGGATATTTGAAAAATTGACAAAAGGATGCATGAT TAAGGGGAATCGTGAAAGCAAGTATAGGATCACCATAGAGAGATCGTATGATATAACTTTTGACAGGTTCAGTAATTGAGTTGTTATAATGATTCAAAAT CTTCTCCTATGTTTACACTGTTAAAGTGGGCAGAAATTATGAAATCATTTTACTAGCACGAACTTGAGAAAAAGACTGGAGTAAAAAGGAAATGTTTATA TTCTATTCATCATGTAGGTATGGTAGCTTCCTTATGCACCTCTAAGTAGAAAAACTCCTTGCTTTTCCCATGTTGCATACTTCCATGTAATTAATTAGAT ACTTGAACAGTTGAAAACCTGATGGCTTGCTTGTAGTGCGTGAGGATCTCACATTTGTTTTTCTTTCAGGTCACCGAGAGCGGCAAACAAGAACGCCACC TTGTTGCGACTGTGGGCAAGTTTAGTGTGATATGGGACTTTCAGCAGGTAAAGAACAGTGCTCATGAATGTTACAGGAATCAACAAGGGCTGAAGAGTTG TTACTGTTATAAGATAGTATTGAAGGATGAGTCAATTGTTGAATCACGATTCATGCATGACAAGTTTGCTGTTAGTGACTCCCCAGAAGCTCCTTTGGTG GTGGCAACTCCTATGAAAGTTAGCTCTTTCAGCCTCTCTGGAAAGAAACATGGTTAAATCTTTGTTTGTTTTTTAAATATTTCTTATAACATCTCAATTA TTAGTGCTAGGCCTAGGAGTGTCTTGAAAATTGTATTTGCTTGTATTCAAGTATGCGTGTTGCTGTTTTTCTTTTGTATATTATGTTTCCATGTGTGATA TTGCAAAGATGAAATTTGGGTATAAACGCATTTCCTTGTGGGTTTTTATTTTTGGGCTCGAGATCTCGAATGGGTAGTTGGAGATTTGCTAGATTTCATG TGAAAAATTGTTGTCTTCTGGCAATTAAGTTGGTAGTATTTTCTTAACTTTCCTAGATCTTATTGTAAGTTAAAATGTTTTAGCATAAAACAGTTTTGAA ATAAACAGTAAAAAACTATGTATGACATTATAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58132; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_226022
| Blastp | Protein CYPRO4 from Cynara with 75.87% of identity |
|---|---|
| Blastx | Protein CYPRO4 from Cynara with 75.87% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421702.1) |
| Pfam | VID27 cytoplasmic protein (PF08553.9) |
| Rfam | - |
| GO | - |