| Id Trinity | FTRINITY_DN56205_c4_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_60554 |
| Sequence | CTGAAATTAACACATTTATTTAACATTCCCCTTTACATTCAGCTTGCACTAAGCTTTGGTTACACCAATCTTCATCCTTAGTCTCTCAAACCTATCCATC TTCAAAGGTTTTGTAAATACATCAGCTAATTAATATTCAGAAGTGCAAAATTCCAGCTTCACAACACCTTTGCTTACTTGATCCCTTATGTAGTGAAATC TAGTTTCTATATGTTTGCTCCTACCATGAGCAACTGGATTCAAAGCAAGGTTTATTGCTGACTTATTGTCCACCTTCAAGAGAACACCTTCTTCTGTTTT GATCTTCAATTCTTCTAACAGAACCCTCATCCAAACAGCTTGACAAGTGCACATATAAGCTGCTATATACTCAGCTTCACAAGAAGATAAAGCCACAACA TCTTGTTTCTTGGAACACCAGCTTATAGGAGCTTCACCAAAGCTGAATAGATAGCTTGAAGTACTTTTTCTATCCACCTTATCCCCACACCAATCTGCAT CAGTGAAGCCAACTAGCCTTGTGTCACTAAGATTGTTCAGTTTTGAAGGAAAATTGATGCCATAGCCAATTGTGCCCTTCAAATACCTTAGCAACCTCTT CATTGCCACCATGTGTGATTGTTGAGGATCCTCCATGTATCTGCTTACCAAACCTACACCATAAGCAATGTCAGGTCGTGTATTGCAGATATACCTCAAT GATCCAACTATTTGTCTAAACCAGGTCTTCTCTACTCCATGTTGTTCTTCAGAATTTTGAGTCACTGCAATTCCAGATTCAGCAGGGGTTGAAATTGAGT TGCAGCCTATCATCTCAAACCTTCTTAGCACATCCATGGTGTACTTAGTTTGATGCATGAAGATTCCATTTTTTGTCCTCTTGAATTCAATGCCTAGGAA ATATGCTAGTTGTCCAAGATCAGACATATCAAATTCTGAGTGCATTTGTTGCTTGAATGTTAAAACTTGTTATCAACAAGTCATCCACATAGAGGCATAC AATTAGATAATCTGGGATGTCATTCCCCTTCACATATACACCATATTCTGCAGTGCACTTCACAAACTCAAGTTGAATTAGAAATGCATCAATTCTTTTG TTCCAAGCTCTTGGAGCTTGCTTCAGTCTATAAAGAGCCTTACGAAGTTTGTACACCATATCATCTTTTCCTTTTGTCTCAAAGCCTAGTGGTTGAGTCA CATACACTTCCTTCTCAAGTGGTCATTCAAGAAGGCAGACTTCACATCCATTTGATGGATTTCCCAGCTTTGATGACTTGTTATTGCAATCACAAACCTC ATTGTTTCTAGCCTTGCCACAGGAGCAAAAAATTCATCATAATCAAGACTTTGCTTCTGCAAATAACCCTATGCTACTAATGTGGCTTTGTACTTAGACA CTTCACCATTAGGATTTAGCTTGGTCATGTACACTCATTTCACTGTTATGGCCTTCTTTCCCTTTGGCAGAACCATCAAACTCCATGTGTTTCTTGTAAC ACCGCGAAATTTGTGAATTTTTAATTAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58221; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_60554
| Blastp | Copia protein from Sophophora with 37.96% of identity |
|---|---|
| Blastx | Copia protein from Sophophora with 39.47% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014625999.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |