Ll_transcript_60561

• Id Trinity: FTRINITY_DN56205_c5_g2_i3
• Name Transcript: Ll_transcript_60561
• Sequence: ACCCTAACCCCCAAGTATGATCACATAATTGTGGCCATAGAAGAGTCCAAAGACCTGTCCAATTACAAGTTGGAAGAGCTACAAAGCTCTCTTGAAGCTC ATGAGCAGAGATTGAAAGAAAGGCTTGGAGAGAACAATGATGATCATGCATTGCAGGCTCAACAATCCAAGAAGCTTGCTGGACAGTGGAACAAAAATAG AAAAGGCAAAGATAAGTGGCAATCTGAGAAATGCAGAAATTGTCTAGGCTCAAGGAATGAAGAAGGGTCATCATCCTCACAGAAGCAATTCAACTCTGTG ATCAATTCTGCAACCAATTCTTCTGATCACAAGAGAAATTCAGTAAAAAATCTTGTGACTAGAAGAAAAGGTGATAAGAGCAGAGTGCAGTGCTACAATT GTAGGAACTATGGGCACTATGCTGCTGAATGCAGAATGAATAGAAACTCCATCAAGAAAGATGAAGAAGTGAAGATGGCACAGGGTGAGGGATCAGATGG TGAAGAGAAATTCTTGCTAATGGCAACAGTCACAGAGAAAAGTGAAGATGCAAATGTGTGGTACTTAGACACAGGTTGCTCAAATCACATGACTGGAAAG AAGGATTGGTTTACTTCTCTTGATGAAACAACAAGAAGTAAGATCAAATTTGCTGATAATAGTGCAGTCTCAGCTGAAGGAATTGGCAACATAATGATAC AAAGAAAAGATGGAAAGAAGGCCTACATTTCTAATGTGTTATATGTTCCAAGAATGAAAAGCAACCTGATAAGCCTAGGACAATTGCTTGAAAAAGGCTA CTCAATGGAGATGAAGGATGGAATGCTGAAAGTATTTGACAAAAACAATCAAAGTATACTTGGAGCACCACTTTCAGCCAATAGAACATTCAAGGTTGAG ATACATGTTGCTGACCAGAATTGTTTTCAGTCAACAACTGATAGAGAAACCTGGCTATGGCACCAAAGGTATGGACATCTAAATCTTAAAAGCTTGAATA TGTTGAGCAAAAATGGTTTGGTGATTGGTTTGCCACAGACTAGAGTCCTTGAACAACTCTGTGTAGAGTGCATCTCAGGAAAGCAATCAAGGAATTCATT TGTCTCACATGTCTCTACAAAATCAGTGAAGAAACTAGAACTAGTCTACACTGATGTTTGTGGTCCATTTGAAGAAAACTCTATTGGAAGCAATAGGTAC TTTGTGACCTTCATTGATGATCATACCAGAAAGATATGGATCTATCCAATGAAAAGGAAAAGTGAGGTGCTGGAAATCTTCAAGAGGTTCAGATCACAAG CAGAGAAACAAAGTGAGAACAAGTTGAAACAACTTAGATCAGATGGAGGAGGAGAGTATGTATCCACTGAATTTCATGAATTCTGCACAAAAGAGGGAAT TGTTCATGAGATTGTTGCTCCATACACACCACAACATAATGGAACAGCAGAAAGGGCTAACAGGACTATCCTCAACATGACAAGATGCATGCTGAAAACA AAGAGTTTGCCAAAGATGTTTTGGGCAGAAGCTGTTTCTACTGCTGCATACATCCTTAACAGATGTCCAAGTAGCAGATTAAACAACAAGACTCCAGAAG AAGCATGGACAGGCCTAAAACCAAGTGTGAAACACATGAGAACATTTGGATGCATCTGCTACAAACATGTTCCTGAAGTCAAGAGAAAGAAGTTAGATGA TAGAGGGGAAAGACTCATCTTCTTAGGATATCACTCAACTGGAGCCTATAGGGTATTTGATCCTGAGAAGAATAAGGTGATGGTGAGCAGAGATTTGAAG TTTGATGAGGATCAATGCTGGACTTGGAATCTCAAAGAATCTGAAGGAATCAAGAACACACTACTACAATTTGAGAATGCAGAAGAGAACTTGATTGAAT CAGAAGATGTCACAACAATTGAGGTAACCAATTCCACAATCAATCCATCAACAAGACAGAGACAAAGGCAGCCACCATCAAGACTGAGTGACTATGAGAT TTTTCCTGACTCAACCATAACAGCAGAGGGTGATTTTGTGCATATGGCACTTCTTGCTGAAATGGAACCAGTAAAAGTAGAAGATGCTCTACAACAATCA CACTGGATTGAAGCAATGCAAGATGAGCTGGTGTCAATAGAAAGAAACAAGACATGGAGTTTGATGGACCTGCCAAAGGGTAAGAAAGCCATAACAGTAA AATGGGTGTACAAAACCAAACTCAATCCTAATGGTGAGGTATCCAAATATAAGGCCAGATTAGTAGCAAAGGGATACTTGCAAAAGCAGGGTCTTGATTA TGATGAAGTGTTTGCCCCTGTGGCAAGGTTGGAGACAGTAAGGCTTGTAATTGCAATAGCAAGCCATCAAAGCTGGGAAATTCATCAAATGGATGTGAAG TCTGCCTTCTTGAATGGTCCACTTGAGAAGGAAGTCTATGTGACTCAACCACCAGGCTTTGAGGTAAAAGGAAGAGAGGAAATGGTGTTCAAACTTCATA AGGCCCTTTATGGACTCAAACAAGCTCCAAGAGCTTGGAACAAAAGGATTGATGCATTCCTAACTCAACTTGAGTTTGTGAAATGCACTGCAGAATATGG AGTATATGTGAAAGGAAATGGCATCACAGACCTATTAATTGTATGCCTCTATGTTGATGACTTGTTGATAACAAGTTCAAGCATTGAAGACATAACAACA TTCAAACAACAAATGCATTCAGAATTTGACATGTCTGATCTTGGACAGCTAGCATACTTCCTAGGCATTGAGTTCAAGAGGACAGAAACTGGAACTTTTA TGCATCAAACTAAGTATACTATGGATGTGCTAAGAAGGTTTGAAATGATAGGCTGCAACTCAATTTCAACTCCTGCTGAGTCTGGAATTGCAGTAGCTCA AGCCTCTGAAGAACAGCATGAGGTTGACAAGACCTGGTTTAGGCAGATAGTTGGGTCACTAAGATATATTTGCAATACAAGACCTGACATTGCTTATGGT GTAGGCTTGGTAAGCAGATACATGGAGGACCCTCAACAATCTCACATGGTGGCTGTGAAGAGACTGTTAAGGTATTTGAAGGGGACAATTGGCCTTGGCA TCAATTTTCCTTCAAAACAAAGCTGTCTCAGTGATACAAAGCTAGTTGGATTTACTGATGCAGATTGGAGTGGGGATAAGGTGGATAGGAAAAGTACTTC AGGCTACCTATTCAGTTTTGGTGAAGCTCCAATAAGATGGTGTTCCAAGAAACAAGATGTTGTGGCTTTATCTTCTTGTGAAGCTGAGTATATAGCAGCC TGCATGTGCACTTGTCAAGCTGTTTGGATGAGAGTTCTGCTTGGTGAATTGAAAATCAGAACAGAAGAAGGTATTCTCTTGAAAGTAGACAACAAATCAG CAATAAACCTTGCAATGAATCCAGTTTCTCATGGTAGAAGCAAACACATAGAAACTAGATTTCATTACATAAGGGATCAAGTGAGCAAAGGTGTTGTGAA GCTGGAATTTTGCAGGTCTGAACAACAATTGGCTGATGTGTTTACCAAACCTTTGAAGAAGGAGAGGTTTGAGAAATTAAGGATGAAGATTGGTGTAATC AAAGCTTAGTGCAGGCTGAATTTAAGGGGGAGTGTTGAAGAAAATATTAAGATTCAGCCTTGTAAGTTCTAGAAAGTTGTTAAGGGAACCTTCCTCTATT AGAAAGTTAGTTAAGTTTGTTGTAGTTAAGTTTCTATAAATAGCTATTGTTGTATTTTGAAAGTGT
• Tissue: flowers
• Gene name: LI_gene_58225;
• Additional information: details;

Expression of Ll_transcript_60561

FPKM

• FPAB: 0
• FPNAB: 0.8
• LF1: 0
• LF2: 0
• LF3: 0.2
• LF4: 0.3
• UF1: 0
• UF2: 0.2
• UF3: 0.4
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_60561

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 36.57% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 36.55% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: Zinc knuckle (PF00098.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;