| Id Trinity | FTRINITY_DN56205_c5_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_60564 |
| Sequence | CTGACCCTAACTAATCAAATGAAGGCTTGTGGGAAAGTAATCAAGGTGAAATCAGTGATTGAGAAGGTGCTAAGGACCCTAACCCCCAAGTATGATCACA TAATTGTGGCCATAGAGGAGTCCAAAGATCTGGAAAATTACAAATTGGAAGAACTACAAAGCTCTCTTGAAGCTCATGAGCAGAGATTGATGGAGAGAAC AATGATGATCATGCATTGCAGGCTCAACAATCCAAGAAGCTTGCTGGACAGTGGAACAAAAATAGAAAAGGCAAAGATAAGTGGCAATCTGAGAAATGCA GAAATTGTCTAGGCTCAAGGAATGAAGAAGGGTCATCATCCTCACAGAAGCAATTCAACTCTGTGATCAATTCTGCAACCAATTCTTCTGATCACAAGAG AAATTCAGTAAAAAATCTTGTGACTAGAAGAAAAGGTGATAAGAGCAGAGTGCAGTGCTACAATTGTAGGAACTATGGGCACTATGCTGCTGAATGCAGA ATGAATAGAAACTCCATCAAGAAAGATGAAGAAGTGAAGATGGCACAGGGTGAGGGATCAGATGGTGAAGAGAAATTCTTGCTAATGGCAACAGTCACAG AGAAAAGTGAAGATGCAAATGTGTGGTACTTAGACACAGGTTGCTCAAATCACATGACTGGAAAGAAGGATTGGTTTACTTCTCTTGATGAAACAACAAG AAGTAAGATCAAATTTGCTGATAATAGTGCAGTCTCAGCTGAAGGAATTGGCAACATAATGATACAAAGAAAAGATGGAAAGAAGGCCTACATTTCTAAT GTGTTATATGTTCCAAGAATGAAAAGCAACCTGATAAGCCTAGGACAATTGCTTGAAAAAGGCTACTCAATGGAGATGAAGGATGGAATGCTGAAAGTAT TTGACAAAAACAATCAAAGTATACTTGGAGCACCACTTTCAGCCAATAGAACATTCAAGGTTGAGATACATGTTGCTGACCAGAATTGTTTTCAGTCAAC AACTGATAGAGAAACCTGGCTATGGCACCAAAGACTAGAGTCCTTGAACAACTCTGTGTAGAGTGCATCTCAGGAAAGCAATCAAGGAATTCATTTGTCT CACATGTCTCTACAAAATCAGTGAAGAAACTAGAACTAGTCTACACTGATGTTTGTGGTCCATTTGAAGAAAACTCTATTGGAAGCAATAGGTACTTTGT GACCTTCATTGATGATCATACCAGAAAGATATGGATCTATCCAATGAAAAGGAAAAGTGAGGTGCTGGAAATCTTCAAGAGGTTCAGATCACAAGCAGAG AAACAAAGTGAGAACAAGTTGAAACAACTTAGATCAGATGGAGGAGGAGAGTATGTATCCACTGAATTTCATGAATTCTGCACAAAAGAGGGAATTGTTC ATGAGATTGTTGCTCCATACACACCACAACATAATGGAACAGCAGAAAGGGCTAACAGGACTATCCTCAACATGACAAGATGCATGCTGAAAACAAAGAG TTTGCCAAAGATGTTTTGGGCAGAAGCTGTTTCTACTGCTGCATACATCCTTAACAGATGTCCAAGTAGCAGATTAAACAACAAGACTCCAGAAGAAGCA TGGACAGGCCTAAAACCAAGTGTGAAACACATGAGAACATTTGGATGCATCTGCTACAAACATGTTCCTGAAGTCAAGAGAAAGAAGTTAGATGATAGAG GGGAAAGACTCATCTTCTTAGGATATCACTCAACTGGAGCCTATAGGGTATTTGATCCTGAGAAGAATAAGGTGATGGTGAGCAGAGATTTGAAGTTTGA TGAGGATCAATGCTGGACTTGGAATCTCAAAGAATCTGAAGGAATCAAGAACACACTACTACAATTTGAGAATGCAGAAGAGAACTTGATTGAATCAGAA GATGTCACAACAATTGAGGTAACCAATTCCACAATCAATCCATCAACAAGACAGAGACAAAGGCAGCCACCATCAAGACTGAGTGACTATGAGATTTTTC CTGACTCAACCATAACAGCAGAGGGTGATTTTGTGCATATGGCACTTCTTGCTGAAATGGAACCAGTAAAAGTAGAAGATGCTCTACAACAATCACACTG GATTGAAGCAATGCAAGATGAGCTGGTGTCAATAGAAAGAAACAAGACATGGAGTTTGATGGACCTGCCAAAGGGTAAGAAAGCCATAACAGTAAAATGG GTGTACAAAACCAAACTCAATCCTAATGGTGAGGTATCCAAATATAAGGCCAGATTAGTAGCAAAGGGATACTTGCAAAAGCAGGGTCTTGATTATGATG AAGTGTTTGCCCCTGTGGCAAGGTTGGAGACAGTAAGGCTTGTAATTGCAATAGCAAGCCATCAAAGCTGGGAAATTCATCAAATGGATGTGAAGTCTGC CTTCTTGAATGGTCCACTTGAGAAGGAAGTCTATGTGACTCAACCACCAGGCTTTGAGGTAAAAGGAAGAGAGGAAATGGTGTTCAAACTTCATAAGGCC CTTTATGGACTCAAACAAGCTCCAAGAGCTTGGAACAAAAGGATTGATGCATTCCTAACTCAACTTGAGTTTGTGAAATGCACTGCAGAATATGGAGTAT ATGTGAAAGGAAATGGCATCACAGACCTATTAATTGTATGCCTCTATGTTGATGACTTGTTGATAACAAGTTCAAGCATTGAAGACATAACAACATTCAA ACAACAAATGCATTCAGAATTTGACATGTCTGATCTTGGACAGCTAGCATACTTCCTAGGCATTGAGTTCAAGAGGACAGAAACTGGAACTTTTATGCAT CAAACTAAGTATACTATGGATGTGCTAAGAAGGTTTGAAATGATAGGCTGCAACTCAATTTCAACTCCTGCTGAGTCTGGAATTGCAGTAGCTCAAGCCT CTGAAGAACAGCATGAGGTTGACAAGACCTGGTTTAGGCAGATAGTTGGGTCACTAAGATATATTTGCAATACAAGACCTGACATTGCTTATGGTGTAGG CTTGGTAAGCAGATACATGGAGGACCCTCAACAATCTCACATGGTGGCTGTGAAGAGACTGTTAAGGTATTTGAAGGGGACAATTGGCCTTGGCATCAAT TTTCCTTCAAAACAAAGCTGTCTCAGTGATACAAAGCTAGTTGGATTTACTGATGCAGATTGGAGTGGGGATAAGGTGGATAGGAAAAGTACTTCAGGCT ACCTATTCAGTTTTGGTGAAGCTCCAATAAGATGGTGTTCCAAGAAACAAGATGTTGTGGCTTTATCTTCTTGTGAAGTTGAGTATATAGCAGCTTGTAT GTGCACTTGTCAAGCTGTTTGGATGAGAGTTCTGCTTGAAGAATTGAAGATCAAAACAGAAGAAGGTGTTCTCTTGAAAGTGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58225; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_60564
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 40.67% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 40.4% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465092.1) |
| Pfam | Integrase core domain (PF00665.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |