Ll_transcript_61365

Id TrinityFTRINITY_DN56212_c0_g1_i1
Name TranscriptLl_transcript_61365
SequenceATACTCTCTATTTTCCATTCCATCAAACCCCACACTTCAATTTTCTTCTTGGAAGTATCAATGGCGTCTACACTTTCTGTAACTGCTCATTTTTCAGGCA TACATGGAGCAACTGAACGCAAAAATCTCCCATTTTCACCGACTTCTTTCTGTAAACTAAAGTCCAGTGCAAATATAGTTGACATGAAGATATTTTCGCG CAGTGGTTGTGAAAAAGCTGGACTCAATCATAGATATTTCCGAGTAAACGCCCTTTTTGGAGGGAAAAAAGAAAATAACGACAAAAGTGATGATGCACCT TCTAAGGCAGGAATGCTTGGAAATATGCAAAATCTTTTTGATACTGTGAAGAAGGCACAAATGGTTGTCCAAGTTGAAGCAGTGCGAGTACAGAAAGAAC TTGCCGTAGCAGAGTTTGATGGTTACTGTGAGGGTGAGTTAATAAAGGTAACATTATCTGGGAATCAGCAACCTATACGAACTGAAATTACTGAGGCTGC TATGGAACTCGGACCAGAGAAGCTTTCGCTTTTAGTCACAGAGGCTTACAAAGATGCACACCAGAAGAGTGTCCAGGCCATGAAGGAAAGGATGAATGAT CTTGCACAGAGCCTAGGAATGCCACCAGGGCTTGGTGGAGGATTAAAGTGATGACTGTGAGATGAACCTCAATTTTGCATACAGAACCATGTCACAAATG TTTATTTCTCCATCTACTATGATTTTGATGTTCAAGTGGTGGACCCTTTCCCCCTTTTAATAAGAAAAAAAGCCTTTTTCTTTATTCCTTATCCTTATTT GTTGAATGTTGAAAAATCAATTATCTCTTAACTTTGCACTCTCATAATTCTATTTTGCACTCCATGTCAAATGATTCAAATCAACTGTGAAGACCCTCCT CTATTTAAAATCTTGTGGTTAATGAAAAATGGTTTACACAATTGAGAGGACTAACAGCAACATAAATGAATCTGACCTGGTTGATTCATGGTTATAGTTT TTATTTTAAGTTTTGATAACCACATAATATGTAACTTTATCATAAATCTTTATCGAGGTCAATGGTCTTAAAATAAAAAACAATCATCTTTTACTTTAAA TTTGTATGTACCATTTTTTTTCATTTTGTACATGATAAAATGCTAGCACATTTAAATAAACTCATAACACCATAATAGACTATAAAAGTAGTATTTTACA TATAACTAATGTTACCATTTTTAAAACAAAAATAACCTCAATAAACAGTCCAAACAGTTTAATAGGCATAAATTCAGACTAAGTTGTAGTGTTCATTCAT CATATGTCCTAAATGGATAGATGTTAACCACTTGTTTTGAGTTCTGTAGAAACAGGTGTTTGAAAGTAACTGAAGAAAATGACTTCCTTATTATATCAGA ATTATGATTACTATGAGCCATTTATGATTCTGATAAGTCACAGAAGAAGGAGTCTCAAGTACAAAAAATGGGTGAGTAGTGTGAGATGCCTTTTCACTGC TGCCTCAGAAAAGTGTTGTCTTTGTTTCATTTGTCAGTTTTGTCATTCTCAAATATTACCAAAAGCTGTCTCCCTATAACACCATGCTGTCATGCATCTA ATCAAAGGTTATTCCTCAAAATGTGCCAAGTGGCTCTACTTCACACCTTTCCTACTATTAGTCTCTTTAAAATGCTGAATTTTACTTAATGTCTTCACTG TTTGTGTTGCACTCAAGGCTATTAATTGAGAACCTAATAAGTAATAACCACTCTCTCAAACTGACTCATTGCTACTGTTCCATCAATGGCTTCCTTACCA ACTGTGTCTCCAATATTCTGGATCATGTTCTTAGTGTTGCTTTTAATTTCCTGGTGTGAAGGCTTTGAATTTGTAGTGGCAGGGAGTAAACATATGTGGA AGGTTCCACTTCACTCACCAGATTCACTCAATAGGTGGGCCAGGAGCCAACTCTTTAAGATCGGGGATACTCTTGTATTCAAATATGATAACAGAACAGA ATCAGTGCACGTAGTGAATAAGGAGGACTATTTAGCATGCAATACATTGGGGAATCACACAGTATTCCGAGACGGGCATTCCAAGTTCGAGCTTCGGGAT TCAGGGCCAATTCACTTCATAAGTGGATCACAAGATCATTGCCAGATGGGGTTAAAGCTAGTTGTGCTGGTCATGTCTCCTAGCCATGCTGGTAATGAAA CTGTTCATTCCCCGCCTATCTCGCTCGCGCTACCTTCACCCGGACCCTCTGCACTCTCACCAAGTATTAATCAAGCTGTTCCACACACTTCAAATGCTGT ATTCATCTCAGCTGTCACGGGGTTGGGGGTTTCAATGCCCATGATCATATTCTTAAGTTGAGATTGAAACAATATATATGTTAATGCATTATATATTATA GTAAGATGGACTAAAAATAAGTTATCATGTTAACACACAATAATTATTTACTGCAGAAGTTTTTCACTATTTAGCCCCATACCCAAAAAAGACATCAACA GTCTAGAGTTGTGTCAATTACTTCAACAGAGAGC BLAST
Tissueflowers
Gene nameLI_gene_58280; 
Additional informationdetails; 

Expression of Ll_transcript_61365

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_61365
BlastpNucleoid-associated protein At4g30620, chloroplastic from Arabidopsis with 65.8% of identity
BlastxNucleoid-associated protein At4g30620, chloroplastic from Arabidopsis with 65.22% of identity
EggnogBinds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (By similarity)(COG0718)
KeggLink to kegg annotations (AT4G30620)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463223.1)
PfamYbaB/EbfC DNA-binding family (PF02575.15)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;