Ll_transcript_61367

• Id Trinity: FTRINITY_DN56212_c0_g1_i2
• Name Transcript: Ll_transcript_61367
• Sequence: ATACTCTCTATTTTCCATTCCATCAAACCCCACACTTCAATTTTCTTCTTGGAAGTATCAATGGCGTCTACACTTTCTGTAACTGCTCATTTTTCAGGCA TACATGGAGCAACTGAACGCAAAAATCTCCCATTTTCACCGACTTCTTTCTGTAAACTAAAGTCCAGTGCAAATATAGTTGACATGAAGATATTTTCGCG CAGTGGTTGTGAAAAAGCTGGACTCAATCATAGATATTTCCGAGTAAACGCCCTTTTTGGAGGGAAAAAAGAAAATAACGACAAAAGTGATGATGCACCT TCTAAGGCAGGAATGCTTGGAAATATGCAAAATCTTTTTGATACTGTGAAGAAGGCACAAATGGTTGTCCAAGTTGAAGCAGTGCGAGTACAGAAAGAAC TTGCCGTAGCAGAGTTTGATGGTTACTGTGAGGGTGAGTTAATAAAGGTAACATTATCTGGGAATCAGCAACCTATACGAACTGAAATTACTGAGGCTGC TATGGAACTCGGACCAGAGAAGCTTTCGCTTTTAGTCACAGAGGCTTACAAAGATGCACACCAGAAGAGTGTCCAGGCCATGAAGGAAAGGATGAATGAT CTTGCACAGAGCCTAGGAATGCCACCAGGGCTTGGTGGAGGATTAAAGTGATGACTGTGAGATGAACCTCAATTTTGCATACAGAACCATGTCACAAATG TTTATTTCTCCATCTACTATGATTTTGATGTTCAAGTGGTGGACCCTTTCCCCCTTTTAATAAGAAAAAAAGCCTTTTTCTTTATTCCTTATCCTTATTT GTTGAATGTTGAAAAATCAATTATCTCTTAACTTTGCACTCTCATAATTCTATTTTGCACTCCATGTCAAATGATTCAAATCAACTGTGAAGACCCTCCT CTATTTAAAATCTTGTGGTTAATGAAAAATGGTTTACACAATTGAGAGGACTAACAGCAACATAAATGAATCTGACCTGGTTGATTCATGGTTATAGTTT TTATTTTAAGTTTTGATAACCACATAATATGTAACTTTATCATAAATCTTTATCGAGGTCAATGGTCTTAAAATAAAAAACAATCATCTTTTACTTTAAA TTTGTATGTACCATTTTTTTTCATTTTGTACATGATAAAATGCTAGCACATTTAAATAAACTCATAACACCATAATAGACTATAAAAGTAGTATTTTACA TATAACTAATGTTACCATTTTTAAAACAAAAATAACCTCAATAAACAGTCCAAACAGTTTAATAGGCATAAATTCAGACTAAGTTGTAGTGTTCATTCAT CATATGTCCTAAATGGATAGATGTTAACCACTTGTTTTGAGTTCTGTAGAAACAGGTGTTTGAAAGTAACTGAAGAAAATGACTTCCTTATTATATCAGA ATTATGATTACTATGAGCCATTTATGATTCTGATAAGTCACAGAAGAAGGAGTCTCAAGTACAAAAAATGGGTGAGTAGTGTGAGATGCCTTTTCACTGC TGCCTCAGAAAAGTGTTGTCTTTGTTTCATTTGTCAGTTTTGTCATTCTCAAATATTACCAAAAGCTGTCTCCCTATAACACCATGCTGTCATGCATCTA ATCAAAGGCTATTAATTGAGAACCTAATAAGTAATAACCACTCTCTCAAACTGACTCATTGCTACTGTTCCATCAATGGCTTCCTTACCAACTGTGTCTC CAATATTCTGGATCATGTTCTTAGTGTTGCTTTTAATTTCCTGGTGTGAAGGCTTTGAATTTGTAGTGGCAGGGAGTAAACATATGTGGAAGGTTCCACT TCACTCACCAGATTCACTCAATAGGTGGGCCAGGAGCCAACTCTTTAAGATCGGGGATACTCTTGTATTCAAATATGATAACAGAACAGAATCAGTGCAC GTAGTGAATAAGGAGGACTATTTAGCATGCAATACATTGGGGAATCACACAGTATTCCGAGACGGGCATTCCAAGTTCGAGCTTCGGGATTCAGGGCCAA TTCACTTCATAAGTGGATCACAAGATCATTGCCAGATGGGGTTAAAGCTAGTTGTGCTGGTCATGTCTCCTAGCCATGCTGGTAATGAAACTGTTCATTC CCCGCCTATCTCGCTCGCGCTACCTTCACCCGGACCCTCTGCACTCTCACCAAGTATTAATCAAGCTGTTCCACACACTTCAAATGCTGTATTCATCTCA GCTGTCACGGGGTTGGGGGTTTCAATGCCCATGATCATATTCTTAAGTTGAGATTGAAACAATATATATGTTAATGCATTATATATTATAGTAAGATGGA CTAAAAATAAGTTATCATGTTAACACACAATAATTATTTACTGCAGAAGTTTTTCACTATTTAGCCCCATACCCAAAAAAGACATCAACAGTCTAGAGTT GTGTCAATTACTTCAACAGAGAGC
• Tissue: flowers
• Gene name: LI_gene_58280;
• Additional information: details;

Expression of Ll_transcript_61367

FPKM

• FPAB: 0.1
• FPNAB: 0.5
• LF1: 0.2
• LF2: 0
• LF3: 0
• LF4: 0
• UF1: 0.1
• UF2: 0.1
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_61367

• Blastp: Nucleoid-associated protein At4g30620, chloroplastic from Arabidopsis with 65.8% of identity
• Blastx: Nucleoid-associated protein At4g30620, chloroplastic from Arabidopsis with 65.22% of identity
• Eggnog: Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (By similarity)(COG0718)
• Kegg: Link to kegg annotations (AT4G30620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463223.1)
• Pfam: YbaB/EbfC DNA-binding family (PF02575.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;