| Id Trinity | FTRINITY_DN56224_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_61782 |
| Sequence | ACTCAATTGATTCGTTTAATTTTATTGTTGTAGTCATTTCTTTTCTTGCACGTTGACGTTCGGCTAGGAAAGATAGTTATGATTTACGAAAGGTGTTAGG TTTGTGTGTGTAGTCTGACTCGTAAGGACCAAAAGCACATTTCACAGTTATGAATTTTGATCTGTTTTGGACCAATTGGTGACGTAAGCCGAAAAACCCC TTAAACCTTTTCAAACACTTTTTTTTTCCAGCAAAACCCTAATCCCTTTCCACCGCAATGGAGGAACAGAGCGAGGGAGAAGATAACAAAGAATTATACG CACTTTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTGTATCACCCTGACAAATATCAAGCTCCTCT CATGAAAGATATTGCTACGGAGAATTTTCAACGGATATGTGAAGCGTATGAGATATTATCAGATCCAAATAAGAGACAGATATATGATATCTATGGAATG GAAGGGTTGAAGTCTGGTTTGGAACTTGGTCCAAGGCTTGAAAAAGCTGAAGAAATCAAGGCTGAGTTGGAGAGATTGAAGAAAATGAAGGAACGCCAAA AGATGATGTCGCAGTTTCAATCTTCTGGTACAATTCTAGCAAGTATGTCTATGCCACACTTTCTAGACGGTGATGGCCTTTTCAGAGGAATGGCTATGAC AAGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCAATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTA CTTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGGTTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCAC ACTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACA TGTATGCCACTCTCTACCTTGGAACTTTTCTTTCTCTTCAATGATTTTATAACTGGTAAGCTTAGATTAAACCTGGGATGTATTAGACAATATAACATGG AATGAGATGAATAGTTATACATAATAACATGATGTGGACATGTATGGATCAGTTAATAATCTATCAAAATCCGAATGTACAATATATGTATGGATACCAA TGGATCAATTACTTCTTCTATCTGTGAGATTTGTTGATATTAAGATAGTCAGCTACAGTATCTGACATTCATCCAGGAAAGTGAGGTGTACATTGTATAA GCAAATATCCTATCATCTTTTGATTTTGCAAAACTCAAGGGAGCAAAGGAATGATCTTTCTGTCATTTCCAAGTTCCAACTGATACAGCTTGATTTGGGA CAACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGACACAACAGTTC GGTATACCCATCGTTTTTCTCGTAATTCACTTGGCTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATC GAAATTCAGCACTGTCCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCAAAAGTTAATTATTCCGGTT TTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGAATTTTTGTATTAAACCCTATT ACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAGAAAACTTCTAATCAGGTTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACT ACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTA AATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTC ATGAGGGTGTTAAAAAATCAGGCATCATGGGTTTTTGTGATCCATGCCCTGGAGAACTTAAACAATTGTATGTAGAGTACGTTTATGCCGGTAATCAATA CAAGGTTTGTGTTGGTGATTTTGAAGAATTGCTGCTACCCCAGGGTACCCACAGGATATAAAGATTATTATATGCATCAGTAACATTGTTACCTCTTGCA GTTTTGCCTGGTTTACATGCGTGAGGTAGGATTTATTCTCTTAGATTGAATTAGAAAATGTACCTTTTACAATTTTGGGACATTGGTACATTACTTATTT TTGTAATTTATTTTGTTCCCCTCACCACCCCAAAAATGTACGAAATAAGGGCATTGTAGGAGGTAATGATATTATTTTGTCCAGCTACTAAGCTTTTACA TTGTGTAACTCTGGTGCCGGATCCCCACTTTTGATTTTGCTTACTCCTTTGTTTATTGTTGATTCGGTTCCAATTCATACAATAAATTCGTTTTTGGGGC AACATTAGCTTTAAGAATTTTGATATTGCGTTTTCACTTTTTAGTTTCCATTTTGCTTTGTACTTCGCATAATTGACAAGACACTAGTGATTTTGTTGCA ACATAGCAATTTGAGTAATTGACAATTAAATAAGCTAATTTTGTCTTGCTATTTTTTGTTATCATTATAATGCTATCACATGATTAGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58361; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61782
| Blastp | Chaperone protein dnaJ 13 from Arabidopsis with 69.76% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 13 from Arabidopsis with 62.37% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G35720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445060.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |