| Id Trinity | FTRINITY_DN56224_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_61786 |
| Sequence | CTGGGCTTCATTCACGAACTCATAACCCATCCAGTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAA TTCTTGGCTACTGCCACCAACAAACAAAAGCACTCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGA CGTTCAGCTATGAGAGTTATGATTTATGAAGTTCTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTC GTTCTGATTCGGACCAATCGGTGACGTAAGCTAATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAAC GGAGAAGATAACAGAGAACTATACGCACTCTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATC ACCCTGACAAATACCAAGATTTTCACATGAAAGATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAG GCAAATATATGATATCTATGGTATGGAAGGCTTGAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGG TTGAGGAAAATGAAGGAACGCCAAAAAATGCTGACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATG GCCTCTTCAGGGGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCAGTGGATGGAAATGA AGGTGGTGGAGCTGCTACTGCTCTGTTTAGGCATCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTTCACTAATTGGAGTG CAAGCATCTCGTAATCTATCATCGCACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGAC AATTGTCAGAAACTGCAAGTGGACATATACAGCTTGCTTTAGGGCCACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGATGAGAGGAGGTCTGCTTC TGGAGAAGTGAAGATTGGTACAGGTTCGTTTGACACATCAGTCCGTTATACTCATCGCTTTTCTCCTAATTCACTTGGCTGCATAGTGGGAAGATTTGGG AGTTCTTCTCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTTAGCACTGTGCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGA AATTTGAACTCTACCGTGGGGGCCAAAAGTTAATTATTCCAATTTTGCTGACAAGGCATTTAAATCCTGTGTTTGCTACTGGAGCGCTGTTTGTCCCAGG ATCTCTTTACTTTGTGCTAAAGAATTTTTTTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAAGGATGAGAATTCTTCTACTCAG ATTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGGAAAAGAAACAAACAATTAGAAACAGGTGGACTAGTTA TTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGCTTTGAATCAACTTCAGAAGTCATAGATGTTACAAC ACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGCGTAAAAAAATCAGGTATCATGGGCTTTTGTGATCCATGTCCAGGAGAA TCTAAACAATTGTATGTAGAGTACGTTTATGCCGGCAATCAATACAAGGTTTGTGTTAGTGATTATGAAGAATTGCTGATACCCCAGAGCTCCCACGTGA TATAGAGATTAGTATTGTCTTGAGGTACATTTTGTTCTGTTAGATTGAATTAGAAAGTTACCTTCACAATTTTGGGGCCATAAGAAACTATGCGTTTTTC TACCAAAAAAAGAAAGTATGCGTTTAAAATGTGTCGAGATGTATTTAAAGCAATTATTTAAAAGAAGAGTCATAATCAGGTGTCAAGATGTCGAAAGTAT TTTTAAAAAAAATACGAAGGTATTAACACCAAACTGGAAAGTATGCGTTATTTTAGTACGTTACATTTTGTATTAATCTAATCATTATTGAGTATAATGA ATGGTTGACATTATCAGTCGATGAATTTGGTTCAAATTCATGTGCTTCAGTATATCTATACTATTAATATCTATACTTCTATATTTATACTTAAGGGAAA ACACAAAATAACCATGGTGTAATTTGTGTTTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58361; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61786
| Blastp | Chaperone protein dnaJ 13 from Arabidopsis with 66.23% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 13 from Arabidopsis with 66.23% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G35720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445060.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |