Ll_transcript_61789

• Id Trinity: FTRINITY_DN56224_c0_g1_i17
• Name Transcript: Ll_transcript_61789
• Sequence: CTGGGCTTCATTCACGAACTCATAACCCATCCAGTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAA TTCTTGGCTACTGCCACCAACAAACAAAAGCACTCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGA CGTTCAGCTATGAGAGTTATGATTTATGAAGTTCTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTC GTTCTGATTCGGACCAATCGGTGACGTAAGCTAATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAAC GGAGAAGATAACAGAGAACTATACGCACTCTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATC ACCCTGACAAATACCAAGATTTTCACATGAAAGATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAG GCAAATATATGATATCTATGGTATGGAAGGCTTGAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGG TTGAGGAAAATGAAGGAACGCCAAAAAATGCTGACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATG GCCTCTTCAGGGGGTATATTGTTCACTTCATGGCACTTTTTTACTTGTTTTTGTCCTTCTCTCACTGTGCACTCCTTTGTTGATGAACACTAAATAGTGT AGCTTTCAGTCGGCATTTATAACGAGATGGAATAGAACATCTGTTATGCTTGGTGTATTCTAAAAATTGATCAAAACAGGGCATAGGAGTAAAAAGTAGA CCTTGTTTGTACTAAAAAGGTGGAAGTGGAACCAAACGGAATAGAGCAGAATACATCCAGCTTCATTGTATTCTGTCCATGGGCCAAACACTACTGTAGA GTTATTGCCTCAGTTTGAAAGCATAAGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCA GTGGATGGAAATGAAGGTGGTGGAGCTGCTACTGCTCTGTTTAGGCATCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTT CACTAATTGGAGTGCAAGCATCTCGTAATCTATCATCGCACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAA TTTATGGACCCGACAATTGTCAGAAACTGCAAGTGGACATATACAGCTTGCTTTAGGGCCACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGATGAG AGGAGGTCTGCTTCTGGAGAAGTGAAGATTGGTACAGGTTCGTTTGACACATCAGTCCGTTATACTCATCGCTTTTCTCCTAATTCACTTGGCTGCATAG TGGGAAGATTTGGGAGTTCTTCTCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTTAGCACTGTGCGCTGGATGTATACAGTAGGAATTCA GGGTATTTTCTGGAAATTTGAACTCTACCGTGGGGGCCAAAAGTTAATTATTCCAATTTTGCTGACAAGGCATTTAAATCCTGTGTTTGCTACTGGAGCG CTGTTTGTCCCAGGATCTCTTTACTTTGTGCTAAAGAATTTTTTTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAAGGATGAGA ATTCTTCTACTCAGATTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGGAAAAGAAACAAACAATTAGAAAC AGGTGGACTAGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGCTTTGAATCAACTTCAGAAGTC ATAGATGTTACAACACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGCGTAAAAAAATCAGGTATCATGGGCTTTTGTGATC CATGTCCAGGAGAATCTAAACAATTGTATGTAGAGTACGTTTATGCCGGCAATCAATACAAGGTTTGTGTTAGTGATTATGAAGAATTGCTGATACCCCA GAGCTCCCACGTGATATAGAGATTAGTATTGTCTTGAGGTACATTTTGTTCTGTTAGATTGAATTAGAAAGTTACCTTCACAATTTTGGGGCCATAAGAA ACTATGCGTTTTTCTACCAAAAAAAGAAAGTATGCGTTTAAAATGTGTCGAGATGTATTTAAAGCAATTATTTAAAAGAAGAGTCATAATCAGGTGTCAA GATGTCGAAAGTATTTTTAAAAAAAATACGAAGGTATTAACACCAAACTGGAAAGTATGCGTTATTTTAGTACGTTACATTTTGTATTAATCTAATCATT ATTGAGTATAATGAATGGTTGACATTATCAGTCGATGAATTTGGTTCAAATTCATGTGCTTCAGTATATCTATACTATTAATATCTATACTTCTATATTT ATACTTAAGGGAAAACACAAAATAACCATGGTGTAATTTGTGTTTTCC
• Tissue: flowers
• Gene name: LI_gene_58361;
• Additional information: details;

Expression of Ll_transcript_61789

FPKM

• FPAB: 0.7
• FPNAB: 0.7
• LF1: 0.3
• LF2: 0.4
• LF3: 0.3
• LF4: 0.3
• UF1: 0.4
• UF2: 0.3
• UF3: 0.6
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_61789

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 63.43% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 63.43% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: Domain of unknown function (DUF3395) (PF11875.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;