| Id Trinity | FTRINITY_DN56224_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_61790 |
| Sequence | ACTCAATTGATTCGTTTAATTTTATTGTTGTAGTCATTTCTTTTCTTGCACGTTGACGTTCGGCTAGGAAAGATAGTTATGATTTACGAAAGGTGTTAGG TTTGTGTGTGTAGTCTGACTCGTAAGGACCAAAAGCACATTTCACAGTTATGAATTTTGATCTGTTTTGGACCAATTGGTGACGTAAGCCGAAAAACCCC TTAAACCTTTTCAAACACTTTTTTTTTCCAGCAAAACCCTAATCCCTTTCCACCGCAATGGAGGAACAGAGCGAGGGAGAAGATAACAAAGAATTATACG CACTTTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTGTATCACCCTGACAAATATCAAGCTCCTCT CATGAAAGATATTGCTACGGAGAATTTTCAACGGATATGTGAAGCGTATGAGATATTATCAGATCCAAATAAGAGACAGATATATGATATCTATGGAATG GAAGGGTTGAAGTCTGGTTTGGAACTTGGTCCAAGGCTTGAAAAAGCTGAAGAAATCAAGGCTGAGTTGGAGAGATTGAAGAAAATGAAGGAACGCCAAA AGATGATGTCGCAGTTTCAATCTTCTGGTACAATTCTAGCAAGTATGTCTATGCCACACTTTCTAGACGGTGATGGCCTTTTCAGAGGAATGGCTATGAC AAGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCAATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTA CTTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGGTTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCAC ACTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACA TATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGT TCATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGGCTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTG GTGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCA AAAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGGTT ATCATTCAAATAAATGTTACATTAATAACCAACTTCTTTAACAGTTTATGCTGGTCTGTTTTTGTTAAGGACTATAAATTAACTTTTAATGTGCCAGTTA AGAAGGAAATATTTTCTTGTTGTCATTTGCTTTCCTCTGAATAATGTAGCTCATTTTGATCCTGTACCATTCTTTTTATCTTCTGCAAAATAGAACGCTG TTCCAAATGAGCTATCAATATTCATTACTGTGGTATCTTTAATTCTACTATATTTATGTAATGAAAATATGAAATGAGTATTGTGCACAACAGCATCTCT AGATTTGGTACCTGCCAATAATTTCGCACTCTAGATTTTGAGTGTCCCTCTGATTATGTAGCTCACAAGGTTATCAACTATTTTTCCTGCTATTTTCATT TGTCTGCCCAGTAGCTGCATTGTTGTACATAAAAAGCAAGGGGTTAGAAGCTGTATTTTCTTTTGGTGGTATTTCCTGTATATTTTTCTTGTGTTCTTAC TTTATATTAAGCTCCACTTGCAACTAACATTGATTGAAAATAAAGGAAACACATCCCATACTTTTCAATGATTAATTCATTCATTTAAGATGCACCATTA GTTACAAACATCTTGGTCATCAGTTTTTATTACCCAGTGTTTTTGGAGTGATAGGGGAAAATGTGGTAAATACTTATTTTTTGACCAATATGAAAGAGTT GGTTGTTTGGTTTATGGACAATTCGATGATATTTCCCTTGTATTTTCTTCTAATACATGAGTTGTGTATTTGCAGAATTTTTGTATTAAACCCTATTACC TTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAGAAAACTTCTAATCAGGTATTCGCCTGTGCATTTATTCAGTGTGCTTTTTTATTTCTTGTCTG CAACTATATCCTTCTTCATGTCGAACACTTTTTTTGTTGCTGTTTGATGTCTACGTCAACACTCAACACATACATTCTTCAATAATTTGAAATCTGCTTC TTGTTCATGCATGGCACACCTTATGCTTGCGGGAAAGAGAAAAAGTGGGAAATAAATCTAACTTCCTGTCAAGGTTCAGGAAGCAAGGGCTGCATCAGAG AAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAAA GAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATTC TGGCCAACTCAAGCTTCATGAGGGTGTTAAAAAATCAGGCATCATGGGTTTTTGTGATCCATGCCCTGGAGAACTTAAACAATTGTATGTAGAGTACGTT TATGCCGGTAATCAATACAAGGTTTGTGTTGGTGATTTTGAAGAATTGCTGCTACCCCAGGGTACCCACAGGATATAAAGATTATTATATGCATCAGTAA CATTGTTACCTCTTGCAGTTTTGCCTGGTTTACATGCGTGAGGTAGGATTTATTCTCTTAGATTGAATTAGAAAATGTACCTTTTACAATTTTGGGACAT TGGTACATTACTTATTTTTGTAATTTATTTTGTTCCCCTCACCACCCCAAAAATGTACGAAATAAGGGCATTGTAGGAGGTAATGATATTATTTTGTCCA GCTACTAAGCTTTTACATTGTGTAACTCTGGTGCCGGATCCCCACTTTTGATTTTGCTTACTCCTTTGTTTATTGTTGATTCGGTTCCAATTCATACAAT AAATTCGTTTTTGGGGCAACATTAGCTTTAAGAATTTTGATATTGCGTTTTCACTTTTTAGTTTCCATTTTGCTTTGTACTTCGCATAATTGACAAGACA CTAGTGATTTTGTTGCAACATAGCAATTTGAGTAATTGACAATTAAATAAGCTAATTTTGTCTTGCTATTTTTTGTTATCATTATAATGCTATCACATGA TTAGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58361; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61790
| Blastp | Chaperone protein dnaJ 13 from Arabidopsis with 66.49% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 13 from Arabidopsis with 66.49% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G35720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445060.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |