| Id Trinity | FTRINITY_DN56224_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_61772 |
| Sequence | CTGGGCTTCATTCACGAACTCATAACCCATCCAGTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAA TTCTTGGCTACTGCCACCAACAAACAAAAGCACTCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGA CGTTCAGCTATGAGAGTTATGATTTATGAAGTTCTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTC GTTCTGATTCGGACCAATCGGTGACGTAAGCTAATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAAC GGAGAAGATAACAGAGAACTATACGCACTCTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATC ACCCTGACAAATACCAAGATTTTCACATGAAAGATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAG GCAAATATATGATATCTATGGTATGGAAGGCTTGAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGG TTGAGGAAAATGAAGGAACGCCAAAAAATGCTGACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATG GCCTCTTCAGGGGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCAGTGGATGGAAATGA AGGTGGTGGAGCTGCTACTGCTCTGTTTAGGCATCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTTCACTAATTGGAGTG CAAGCATCTCGTAATCTATCATCGCACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGAC AATTGTCAGAAACTGCAAGTGGACATATACAGCTTGCTTTAGGGCCACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGATGAGAGGAGGTCTGCTTC TGGAGAAGTGAAGATTGGTACAGGTTCGTTTGACACATCAGTCCGTTATACTCATCGCTTTTCTCCTAATTCACTTGGCTGCATAGTGGGAAGATTTGGG AGTTCTTCTCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTTAGCACTGTGCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGA AATTTGAACTCTACCGTGGGGGCCAAAAGTTAATTATTCCAATTTTGCTGACAAGGCATTTAAATCCTGTGTTTGCTACTGGAGCGCTGTTTGTCCCAGG ATCTCTTTACTTTGTGCTAAAGGTTATCATTCAAATCAATTTTACATTAAAACCGAATTATTGAGCAGTTTCTGCTGGTTTGTTTTTGTGAAGGCCTATA AATATTTATACTCCGTTAATTGTTAGTATGTCAGTTAGGAAGAAAATATTTTGTTCTGATCATTTGCTTTCCTATGAATAATGTAGCACATTAGGACCCT GTACACGTCGTTGTTATCTTCTGCCAAAGAGAATGTTATTCCAAATGAGCTATCAATATCCAGTACTGTGATATCTTTAAGTTCTATATAATTTTTTAAT GAAAACATGAATTGTATACTGTGCACAACCAGCATCTCTGTAAGAGTACACTGCTAAATTTTGTACCTACTAATAATTTCCCTCTCAAGATTTTGAGTTT CCCTTTATGTAGTTGACATGGCTATCAAGTGTATTTCCTGCTATTTTCGTTTGTCCGACTTACAAGCTGTATTTTCTTTTGGTGGTATTTCCTGTATAGT CATCTTCTATTCTTACTTTATCTTGAGCTCCATTTCAAGTAAAATTGATTGAAAATAAAGAAAACACGCCCCTAACTTTTCAAAGATGCATTCATTCATA TAAGCTGCACCATTAGTTGCAAAGATCTTTTATTACCCAGCGTTTGATGATTTTTCCCTCGTCCTTTCTCCTAATTATTGAGTTGTGTATTTACAGAATT TTTTTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAAGGATGAGAATTCTTCTACTCAGATTCAGGAAGCAAGGGCTGCATCAGA GAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGGAAAAGAAACAAACAATTAGAAACAGGTGGACTAGTTATTATGAGAGCACTATATGGAAATCAA AGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGCTTTGAATCAACTTCAGAAGTCATAGATGTTACAACACCTCTGAATTTTCTGGTTAATGATT CTGGCCAACTCAAGGTATATTTCTTTTATATTTTTCGCCTACTTATCCTTATGAAAAACTATTGCAGTAAATATAGGATAAAATGCAAAACACACAGTAG AAGTTTAATATATTGGAATAGAACTAAATGTTGCTGGGTCCAAGGACATGGTAAGTTAACCTTTTGAGTATTTGTTGCACCTCTAAAATCTTGGACGATC AATCAACAATGTAACCTTCCTGTGCATTTAGAGGGAGGCAGCAGAAACCTAAATAGAGAGGTCTCTCAAGTGAGCAAGAATTCCTTCAGAATTTAATAAG CATGTACTTTTTTTACAGTGATCGATGTAAGAAGCAACTATCGGTACCTAGTAACGGCCACCCAGGATGTGACATATTTTTCACATGGTTTGATTAACTT ATGAATTTAATGTCTGTATTGAGCCTTTACATCAATGAGAAACATGCCTATTTAATTTTATTATTATCACCAAGCTTACGCTCTTGACATTTTATGCAAA TTGTGACGGCACATGTATAGCTAAGATTTGCCGTAGATCACCACTATACTGATGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58361; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61772
| Blastp | Chaperone protein dnaJ 13 from Arabidopsis with 67.36% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 13 from Arabidopsis with 67.36% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G35720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445060.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |