| Id Trinity | FTRINITY_DN56224_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_61778 |
| Sequence | CTGGGCTTCATTCACGAACTCATAACCCATCCAGTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAA TTCTTGGCTACTGCCACCAACAAACAAAAGCACTCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGA CGTTCAGCTATGAGAGTTATGATTTATGAAGTTCTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTC GTTCTGATTCGGACCAATCGGTGACGTAAGCTAATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAAC GGAGAAGATAACAGAGAACTATACGCACTCTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATC ACCCTGACAAATACCAAGATTTTCACATGAAAGATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAG GCAAATATATGATATCTATGGTATGGAAGGCTTGAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGG TTGAGGAAAATGAAGGAACGCCAAAAAATGCTGACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATG GCCTCTTCAGGGGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCAGTGGATGGAAATGA AGGTGGTGGAGCTGCTACTGCTCTGTTTAGGCATCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTTCACTAATTGGAGTG CAAGCATCTCGTAATCTATCATCGCACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGAC AACTGTCAGAAACAGCAAGCGGACATGAAAGTGAGGTGTACATTGTATAAGCAAATATCCTATCATCTTTTGATTTTGCAAAACTCAAGGGAGCAAAGGA ATGATCTTTCTGTCATTTCCAAGTTCCAACTGATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGAAGAGAGAGGGTC TGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGGCTGCATAGGAGGAAGA TTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTAGGAATTCAGGGTATTT TCTGGAAATTTGAACTCTTCCGTGGAGGCCAAAAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGCGTTGGTTGT CCCAGCTTCTCTGTACTTTGTGCTGAAGAATTTTTGTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAGAAAACTTCT AATCAGGTTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAACAGGTGGAC TGGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGTCATAGATGT TACAGTACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTCATGAGGGTGTTAAAAAATCAGGCATCATGGGTTTTTGTGATCCATGCCCT GGAGAACTTAAACAATTGTATGTAGAGTACGTTTATGCCGGTAATCAATACAAGGTTTGTGTTGGTGATTTTGAAGAATTGCTGCTACCCCAGGGTACCC ACAGGATATAAAGATTATTATATGCATCAGTAACATTGTTACCTCTTGCAGTTTTGCCTGGTTTACATGCGTGAGGTAGGATTTATTCTCTTAGATTGAA TTAGAAAATGTACCTTTTACAATTTTGGGACATTGGTACATTACTTATTTTTGTAATTTATTTTGTTCCCCTCACCACCCCAAAAATGTACGAAATAAGG GCATTGTAGGAGGTAATGATATTATTTTGTCCAGCTACTAAGCTTTTACATTGTGTAACTCTGGTGCCGGATCCCCACTTTTGATTTTGCTTACTCCTTT GTTTATTGTTGATTCGGTTCCAATTCATACAATAAATTCGTTTTTGGGGCAACATTAGCTTTAAGAATTTTGATATTGCGTTTTCACTTTTTAGTTTCCA TTTTGCTTTGTACTTCGCATAATTGACAAGACACTAGTGATTTTGTTGCAACATAGCAATTTGAGTAATTGACAATTAAATAAGCTAATTTTGTCTTGCT ATTTTTTGTTATCATTATAATGCTATCACATGATTAGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58361; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61778
| Blastp | Chaperone protein dnaJ 13 from Arabidopsis with 62.72% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 13 from Arabidopsis with 62.37% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G35720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445060.1) |
| Pfam | Domain of unknown function (DUF3395) (PF11875.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |