| Id Trinity | FTRINITY_DN56238_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_60631 |
| Sequence | TGAATTTGTCCAAAGGGACAAAGAGGGAGACATAGAGGGACAAAGGGGGAGACCAAGTCTTATATAGAATTATTAGACATTCTCCTTAATATGTGATGGC ATGCAGTGTATAAAGTTGATTTGGTCTCATGATTAAACATAATTTATTGACTTCTCTTAATCACTTAAAAGAAAAGGGTGGAAGGGAACCAAACCCTAAA AAAAGTTTTGCTTTTATGACAATCAATATTATAAAATTAAGTAATTAACAGCTAGAATTTTTTTTTTAATAATTTGTTGATAGGTGAGGCGTTGAAAAAT GCAGACAATTGTGAACAAGTTCCCATTTATGAAGACAAAGATGGTGATTGGATGCTGATTGGAGATGTTCCTTGGGAGTAAGTCTTTCTTAATTAACTCT CTTCATTCTAATCATTTTTTCTCATTAATTAGTAATTAAATATGTTTTCATATTTGAAAAATATTTTGGTTGTTATAGTTTTCTTTATTTAGTTCAAGCT TTTTAAAATATTTTTATAATCTGGTGCATTTGTTATAACAAAGTGAATTAATGAGGGGCTGGGTGCATGTTGTAAATTTTTATTTTTCTATAATAAAAAA GTACTACATATGTACAATTAATTAATAAAACCTATATTTATCGTCTAAGTAATTAACAAAGATTTTATAACAATAATATACTAAAAATAAATATTTTAAA TAAGTTGAATTCAAAACAAAAAATAATAATAAAAGGTTAATTAACTTTAGTCCAATATAATTGTTAAATCAAATTGAATTAAATTTTCTGTAATTAAGAC TCAAATAGTCCAGAAACTCATTCATAGCAAGTAACTATTAGGCTATTGCAGTGACCTATTTAACTCGTCCATTTCTTATTGTATTTATCTTCTTTTATTA CCTTACCAGTAATCTTTCCGAGCACAAAAATAAGCCCTTAAATATACATTTTTTATATTTTTCTTGGGTGGGAGCAACAATGTTAGTTTCATAGGATAAT AATAATAGTGATGAGCGTGTCAAATACGAGTCAAGTAAACCATAAATATTTGTGTCCATTACAAGTCACATAGAAAAGCCACCAAATAGTCATAGTGCAC CCACCACCAAATATATATGATTCCTTGTCTGAAAATTAAATTAGGTCCATGCTAGGAATTTTCATTAACTTTGACACTTGATCTTTATCACTCTTATTTA TAAAAAATTTCTAATGTATACTTATAATTTTTGGGCATTAGTAATATATATTTAAAAAGAAGTTGAATTTCATGAATATGCGTATAGTACACGCTTTAAA CCCTAAAAAATTGTTGTGTGAGGGAGGTATTAGATAAATACAAAATTATTCATTTGTCTTCATCAAATAGCTTAAGCTTTTGGAATATTTATTGATTTTT TTTAGAAATCTCACATATTTAAATGACATCCAAGTTGGTCAAACAATGATAAGAATAAGTTTGAAAAAAACCAACACTTGATTAGACAAGCCCATAGATT AAGTTGTTCATTGACCTAATTAATAAACTCCAAGTTCTACTTTAGTAATCTTAAAATAAAAACATAAAATTATCTTGGACCTCATATAGCAGACATGCGT GCATACTAAAATTAAAATGATGGACACATCATAATGGGGTAAGAAATATCATCCATAATGGCATGTCCTGAAAAGGTAAAGCCATTATTGTTAGACACAT TAAAAGAACAAGAAAAGCTTTTTAGTTGGCCACATTTCCGAGAATGATCAAATGTCCCATGCCAAGTACTATATTTTTTATAACCAAATTATTCTTTTTC GGTGTGTGTGGTTATCTCTCCTAAGAAATGTTACTCATAAGATTTAAACTTTTGACTTTTTGGTCTATCGTAGAATCTATTAGATCAACACCTTATTGGT ATGCAAAATATATATAAACATTATAAAGTAAAATACACATGAGTAAATAGTGAACATTTTACATCAAGGATATATATAGTTCATGTAAATTCTATTTATT TTGCACAATCGTGCATTGCTCCCATTTTTTGTATCAAACTATTATGTACTCGGTAATTGAGTTGACATCTCTTATCCCTTTATATTATCTTTGCTTATAA AAAATATAGGGGAGTGATCAAGTTACTCCAAAAGTAAGTTTAAAAAATTTGTTCCTCATCTTATACCATCAATTCTAGAGAAATCCAGTGGTTTGAATTT GTGGTAAATCTAAACCATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58482; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_60631
| Blastp | - |
|---|---|
| Blastx | Auxin-induced protein AUX22 from Soja with 90.32% of identity |
| Eggnog | Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression(ENOG4111813) |
| Kegg | Link to kegg annotations (547784) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448128.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |