| Id Trinity | FTRINITY_DN56240_c1_g1_i27 |
|---|---|
| Name Transcript | Ll_transcript_59388 |
| Sequence | CCCGAATATCCACATCACCGCCAATTTGCATTCTCAAATTTGTAGAACCCTCTGTCTTTATTAAATTACAGATCTGCTATCCCCGATCACGTCCCCAACT CTATCCCGAACTAATCAAATTGTAGAAAAAATAGAAATAAAATGATGATAACGTGATATATATATATATATATATATATATATATATATGAGATGGTGGT TTAAATTCTGTTTCAGTTCATTCCTGTAATAGTTTCCATTACACTTTCTAGTATACACGTTATCAATTCAGAGCGAAGGAGTCGTTGGAATGGGAAAGCG TAATTCTCAACGGAAAAGTGTTGCTTCTGCTGCTGCAATGTTTGATAGCGATGACGATAGTAGCGCGACTTCGTCGTCAACTGCACCCTCTGATCTTATG TCAATTTCTGAAACTGAACAACTTCAATCTCATCAAGATTCTTTGCTTGATCAAGCTCTTGATGCATTAGATGAGAAAAGGAGTTCAACCAGGGAGAAAG CTTTCTCATCGATTATTGAGGCATTTAATAGCAATATGCAGCATCAATTCGTGGAAAAGAAATTTGCTACCTTGTTACATCAATGTCTGGCTTCAATAAA AAAAGGACCCAAAAAGGCATCTTCTAAGGAAATAGCTTTAGCTGCTCATGTCATTGGTTGTTTGGCTTTGACTGTTGGATGTGGTGACAATGCACGTGAA ATATTTGAAGAAGCAGTTCGTCACGTTGAGGAATCTCTAGCATCTAACTCAGATGTTTCAAAGATACCATCGTTGCTGGAGTGCTTGGCTATAATCACTT TTGTTGGAGGCAATAATCAAGAGGAAACAGAACGGTCAATGGACATAATGTGGCGAGTGATTCATCCTAAATTAGGCTCCAATGTAGGCACTTGTTTCAA CTATACTAATTGTTTGTAATGTGTTTCTTATAATTGTGTTTTGTTCAGTACTAACACTCCAAACATGAAGACAATAACGCTTTTTTATTTTATATTCATG TGTCGAAATTTTCTTCCTAAGATTTACTAGCCAATTATTTCATTGTTTAGGTAGTTGCAGTCAAACCATCTGCTCCATTAATAACCGCTGTGGTGTCTGC GTGGTCTTTTCTCCTCTCTACCGTGAGCAACTTGAAGCTAAATTCAAAGAATTGGCAAAATTCAATATCCTATTTATCCACTCTTCTAGACAAGGAAGAC CGGTCTGTGCGTATTGCTGCTGGCGAAGCGCTGGCTTTAGTTTTTGAGATTGGAGTTATAGATAAATATTCTTCTGAGTCTAGGAGTGCAAGTGATGGAA CTCAAGAAGAGATCAAACCACAGGAAAGTTACATACTTTTACAAGGATTGAAAGGGAAAGTCATAAATCAATGTAAAAACCTTGCTATGGAGGCTGGTGG AAAAGGCTCTGCTAAAAAAGATCTCAATAGTCAGCGGAATTTGTTCCGAGATATCTCAGATTTCTTTGAGTATGGCTACTCTCCTGAAATCTCAACGAAG ATTGGAGGTGATTCACTGCAGACATCGTCATGGTTCCAAATGATACAGTTGAATTTTATGAAGCACTTCCTTGGGGGAGGGTTCACTAAGCATATGCAGG AAAATGAGTTCCTTCATGATGTCTTTGATTTCACACCGAAGAAAAAGTATCTGAATAACAATGAACATAGAATGTCTGGTCTTGAAAAGAGAATGTTCAA GTCTCCGAACTCGGCACTGAACAAGGCTAGGACCCAGTTACTTGATAAACAGCGGTTGTTAACTGAGGTTAGCATCCTTACCATATAACAGAACGTTCAT TTTTATATTCCCTGTTGAATTGCTTAGTTAAAAATGTGGTTCTTTTTTGGGTACTACCAAGGGTACCCTTCACCTTTTTTGATAAAGAACTAATCTCTTT CAGGTTCGTGACTGTCCCTCCTAACATGTGTTACTCCAGGGATCGAACTTTCGACCTTGGAGATCCAGTAGGACCTTACACCACTAGATCAACGTGTTCT TGATAAAAAGAAAAGAAAAATATTGAACTTTAAATACTATTTGAAAATCTTGACAAGCTGCAGCAAACAAATGGATCCAATGTTATATATGAATAACATT CTCATCTGTATGTGCATCCAGTAGCTGAGGCTCTTGGTGTGCATTTAGCATGGCAAAAAACTTATATAGCTTATAGACCCAGTCAATAACTTGTAGAGCT GAGGCGGAGATTGTAATTTTTGTAAAGTAGCTCTTTAATTTTCCAGCAAGTGACAATTTTTTTACCTCCAATCCAATATAACATTACCCATCCTTTTAAG TGTTTAACAAAATTCAGCATGTAAGTTATTGGGTTTTATTGATTTTGTGAAACAGCTCTAATTCATTCAGCCATTTTACAAATGTAAACTCTCATATCTA AGCTAAAATATCAACCTCACAACCATAATTTAGTTTTGCCGAACTGCATATTTTTTCATAATCATGAGTTCTATTCCCTCAGTTTCTGTACTTGATCCTA CTTGCAAGTAACTTTGTGTAATTATTCAATCATCTTATACATACCGGTGGCTTTAATGGCTTACAAATACTACTCTAGTGATGCTGAATTTCTTTTATTT GTTTCTTCTGTTAAACTTACAGGGCAGAAAGTTCGGCCATTACGCAGTTAATATGGATGATGACGAAGCATGAACAATAATTTGGAGATTTGATGGATCA TTCTATATTCATTGCTTATGCTCTTCAGGTCTTTAGACTCTATCAATTGTAAACTAGACCCTCGAGACAGGAGTTTATAATAACGTTACAAATTGTTGAT GAAAAAAACATTATATTATACATGTTATGTTATGGCATCAAGATAACTCTTCATTTTGTTGACATAGTAAAAATATGTAATAATCTCGTCTGGTTATTTT AATGCAATTTTACTTTTAATGTTCTAGTTTTAATATTCTTAGAATGTGTAGAAGAAGAGTAATCAAATATAAAATTTCTTTGATTAGAACTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58502; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_59388
| Blastp | - |
|---|---|
| Blastx | Interferon-related developmental regulator 1 from Sus with 29.11% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437896.1) |
| Pfam | Interferon-related developmental regulator (IFRD) (PF05004.12) |
| Rfam | - |
| GO | - |