Ll_transcript_59308

• Id Trinity: FTRINITY_DN56254_c4_g1_i5
• Name Transcript: Ll_transcript_59308
• Sequence: ACATCTTCATATAATCCTACTTGCACATGGTGAAGAGAAAGAAGAAGAAGAAGAAGAAGGTGAACAAGGGGAGGAAATAGTAGATGAGTTGAATATGCAG CTGAACGTTAGTAGCATTGCTGGAATGACTTCAAAAAATTCACTCGAGCTATGGGGGACAATCAAGGGACGCAAGGTTATAGTAATGGTTGATTCCGGAG CATCCCACAACTTCCTATCACCCGGAATAGTTGAAGAATTGAAGATTGCCACTGAGAAGACGTCGGGTTACTTCGTGGAAGTGGGAAATGGACAGCGCCT AGGGAGTCAAGGGGTCTGTCGAGAGGTTGAACTTCAACTCCCTACACTGAAGATTATCCAGGACTTCTATCTGTTTGATTTGGTTGGTGTAGACGTCATT TTGGGATATGAATGGTTGAAGAGTCTCGGTAAATTCAGCGCAGATTTGGGGCGTTATTTGCTAGAGATTCAGGATAATGGGAGGACCATTGAAATTAGGG GAGACCCAACTTTATCCAGAACAGTGGCCTCTGTAAAAGCCATAATGAAGGAGATGCGAAACGAAACAGAAGCTTATTATGTGGAGTTTGGAATGATGAG TATGATGTGTTCATCGGAGCTTATTATTCCGGGTAGTGTGCAGCATCTTATCCAGGAATTTGGTGATATTTTTCATGAACCAACAGGATTGCCACCTCAA AGACCGTGTGATCATGCCATTATACTGAAGGATGGGGCAGAAATTCCACACATACGACCATATAGGCATCCTCATAGTTACAAGGAAGAAATTGAGAAAT TTGTGAGGGAGATGTTAGCAGCAGGTATGATTCGGCCCAGTGTAAGTCCTTTCTCAAGCCCTTTGATCTTAGTAAAGAAGAAGGATGGAGGATGGCGGTT CTGTGTTGACTATAGAGCTCTCAATAAGGTCACTGTTCCCAACAAGTTTCCGATCCCCATAATTGAGGAGTTGTTGGATGAGATGGGCGAAGCTTCATTT TCTCTAAATTGGATCTGAAATCCGGTTACTACTAGATTCGTATGAAGGAGGAAGACATTCCCAAAACCGCTTTTTGCACCCATGAAGGTCATTATGAGTA TGTGGTGATGCCTTTTGGGCTCACCAATGCTCCCTCAACTTTTCAAGCGCTCATGAATGATGTTTTCAGGCCATATTTGAGGAAGTTTGTGTTAGTCTTC TTCGATGATATCTTGGTTTACAGTAACAACATTGTATCGCATTGTGATCATTTGCGGAAGGTGTTCGAAACGCTAAAGGAGCACAAGTTGTGGGTGAACT ACAAGAAGTGCTGTTTTGGGGCTATCCAATTAGAATATTTGGGACATCTCATTTCTGGAAAGGGAATTGAAGCTGATCCGGAAAAAATTGCAGCAATGAA ACAGTGGCCAATACCTAGAGATATTCGTGGGTTGAGAGGGTTCTTGGGTCTCACGGGGTATTATCGCCGGTTTGTCAAAGCTTATGGGATTATGGCTAAA CCTTTGACACAACTCTTGAAGAAGAACAACTTCAAGTGGTCAACAGAAGCTCAATGTGCATTTGAAGAACTTAAGGCTGCCATGGAAAAATTACCCACGT TAGCTCTACCCAATTTTAATGTGCCATTTGAGGTTGAGACAGATGCGTCCGGATTTGGCATTGGTGTTGTCCTTATGCAACAAGGCAGGCCGTTGGCATT TGTGAGTCAAGCTTTGTCCGAGAGAGCAAGGATGAAATCGGTCTATGAACGTGAATTGATGGCTATTGTGTTTGCGGTGCAAAAGTGGCGACAATACTTG TTGGGTCACCACTTTATTATCCGGACCGACCAAAAGAGTCTTAAGTTCTTATTGGATCAACTCGTGTTGGCGGGGGACCAACTAAAATGGGTTACCAAGT TGATGGGTTTTAATTTTGAAATCCAATACAAGCCTGGGTCAGAAAATAGAGTGGCGGATGCATTGTCACGTGTTATGGAGTACAAATTAATTTCTATGGT CACCAATATTGATCTGGTTGAATTAGTGGATGAGGTTCTAGCTGATGATAAGTTGCTGCGGATTTTGCAAGAGGTTGTCCAGGACCCAAATTCTCATCCA ATGTACACTGTCTCTAAAGGCTGTTTGTGGTACAAAGGAAGACTGGTTTTGCCTAGCACCTCAACACGCATTCCAGTGTTGCTAGAGGAGTTTCATTCAT CGCCTTGGGGAGGGCATTCAGGGGTAGTTCGTACTTATAAACGGATAGCCATGGCATTTCATTGGAAGGGAATGAGACGTGACATAGAAAAATTTGTAAC TGGTTATGACATTTGTCAACATAATAAGTATCAAGCGTTGAAACCGGCAGGATTAATCTAACCTCTTCCAATCCCCAACCATGTGTGGGAAGATGTTTCT ATGGATTTCATTGGAGGGTTACCTAAGGCAAAAGGGGCGGACACAATAATGGTGGTGGTAGATCGATTGAGTAAGTTTGCACACTTTATTCCTTTGCAAC ATCCTTACACAGCTAAAGACGTGGCTCAAGCTTTTATTAAGGATATCATTCGCTTGCATGGTTTCCCTAGTTCTATTGTTTCGGATCGTGACCGTGTTTT TATCAGTTTATTTTGGAAGGAGTTATTTCGCTTGGCAGGGACCAAACTGCGTTTTAGTTCCGCCTACCATCCTCAAACTGATGGTCAAACAGAAGTGGCT AATCGGACACTAGAGACATACTTAAGGTGTTTTGTTAATGAACATCCAAAACAATGGCTAAGGTGGCTGTCTTGGGCAGAACTGTGGTTTAATTGTTCAT AAAATTCGTCCATTAATATGTGTCCTTTTAAGGCATTGTATGGACGAGACCCTCCGTCAATTATTCCCTTCCGCAGCGAGAGCACTGTTGTGGCAGCAAT AGACGCATTGTTAACCAAAAGGGACAACATTCTACACGAACTCAAAACTCATTTGGCAAAAGCCCAACAAAGAATGCGTGATTACGTGGACAAAAAAAGG AGAGAGGTAGAGTTTCAGGTGGGAGATATGGTCTATTTGAAAGCACAGCCATACAAGATTCAGTCATTAACTCCAAAGGTAAATGAGAAACTCAGTCCTC GTTTTTATGGCCCATTTCCTATTGTTGAAAGAGTTGGAGTCGTGGCTTATAGGTTGCAGCTCCCGGATTACTCGCGAGTGCATCCTGTTTTTCATGTCTC ACAACTAAAATATGCATTGCCTGCTAGTATCCCTTGTGAACAGTTACCAGAAAAGGTGTTATCCAGTCGAAAGTTACTGAATGGGCAGATGCAAGTCTTG ATTAAGTGGGCTGATCTCCCAAATCATGATAGCACTTGGGAAGATTTTATATTAGTCAATGAAACTTTTCCTGATTTTCACCTTGAGGATAAGGTGTTGC TCGTTGGGGCGGGTATTGATAAGCCTCCAATTACGAGGGTATTTCAGAGAAGAAAGAAAGGTGACCAGGGTACTTTAGGAAAGAGAGGAAATGAGCATGT TGCACATGACTCTAACCAACAAGATACTTGGCAAGATATGAATGGGTAGAAGATCATGGAATCAAGGAAGAGAGGGTAATATGAGGAGAAGGAATAGCAT AGTGTCAGGGGGAATCATTTAGGGAATTGTGGGGTGACTCTTGTCACAGGGTAGAGAGAAATTATTCCTTTGGTCGTTCTATTGCACTTTCTGCATTCTT AACAGCTTTCTTATTTTCTTATTATACTCTTGCAATCATCCATGATAGCAATGTATAATTTCTGCACTGTTTAATACACAATTCTGCACTGGTTTATTTC TATTGTTGTTCTATTTTCTTTCTTAAATTGTTGGTATCTATCATGATACAAAGTGATGTTGTTAATTGATATGTATAATGTAAT
• Tissue: flowers
• Gene name: LI_gene_58592;
• Additional information: details;

Expression of Ll_transcript_59308

FPKM

• FPAB: 0.2
• FPNAB: 0.6
• LF1: 0.3
• LF2: 0.2
• LF3: 0.3
• LF4: 0.1
• UF1: 0.4
• UF2: 0.1
• UF3: 0.1
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_59308

• Blastp: Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 27.79% of identity
• Blastx: Transposon Tf2-9 polyprotein from Schizosaccharomyces with 33.16% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR109W-B)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015964281.2)
• Pfam: gag-polyprotein putative aspartyl protease (PF13975.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;