Id Trinity | FTRINITY_DN56255_c1_g1_i3 |
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Name Transcript | Ll_transcript_59643 |
Sequence | AGAAAGAAGAGTGTCACTAACTGAAATTTAACATTTGACCGTTAACATTCTTTATAATTAATTCGGTTTTGAACGTGGCTGCGGCATTCAGAAACATCAC AAAATTACAATAAGTCAATTACAATTAACAATGAACCTCTCTACTAATCCCAATTCTTCAATGAAGGGTGGTGAAATCTTGGATTGTGTAAGCTAGGGTT TTCCCTTCACCTTATTCTCATGTTCAATCCTTTCCAACGCTACCTGATGATGTTAGCCAAAGCTGAAGCTGGTAAGAAGAGTAGTGAAGGTTCTGATAAT CATAAGAAATTATTAAAAGATGTTGAAACTATAAGCAAGGTTTTGTACCCGGACGAAAACTCTTACAAGAATTCAGCATCCACTGCAATTTCTCAATCCA AATCCACCAAGATATTCCCCTTACCTGATCCGAAATCAAAGCCTAAAGCCAGTGTAGATGATAAATCAGTCAAGGATAAGAAGTCCATATGGAATTGGAA ACGATTAAAAGCCCTTTCCATCAACCATAGTCGAAAGTTTAATTGTTGTTTTTCTATCCAAGTGCATTTGATTGAAGGGTTGCCTTTGAGTTTCAATGAT GCTAGCCTTCGTGTGTACTGGAAGAGGCAGGATGAGGTTATGGTGACCCATCCGGCCAAGGTGATACAATGTATGGCCGAGTTTGAAGAGATAATGACTC ACACTTGCTCAATCTCTGGAAGTAGGAGTGCCCCCCATAACTCTGCAAAATATGAAGTAAAACATGTTTTGCTCTATGCTTCTATGGTTGGTGCGCCAGA ACTTGATTTAGGGAAGCACTGGGTAGACCTTGCGAGGTTGCTTCCTCTCACACTGGCTATGGATCAAAGAGTTTGTTTCATTGGATGATCTTGCTCTGCT GGCTATGGATCAAATTGAAGCACTTTCAAAGGTTGGGTTGAGAATACAATCTGGGATGTCGGAGGAGGATGCATCATCAATCAAACTGGACTTATCCTTG ATAAACTCTCATTGATTATAGACCCTGGGCTAGGGATGTTTGGTTTTCAGAGCCTCA BLAST |
Tissue | flowers |
Gene name | LI_gene_58603; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_59643
Blastp | Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 51.55% of identity |
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Blastx | Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 49.48% of identity |
Eggnog | NA(ENOG410Y9MA) |
Kegg | Link to kegg annotations (AT5G20610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463634.1) |
Pfam | N-terminal C2 in EEIG1 and EHBP1 proteins (PF10358.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |