Id Trinity | FTRINITY_DN56256_c1_g7_i2 |
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Name Transcript | Ll_transcript_61668 |
Sequence | AGCTTTATATGGTCTCCCAAGGGTGGTGAAGCCAATGACCATGTTGATGATTGGGCTTTTGAGGAGGGACCCCATTCTAATTTTAGTGGACCAAACTGTG GAAGCACAGCTTGTGTGGCTGTCATTCGAGGAAATAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTATTGTCAAGGAAGGGCCAGGCACGTAA TTTGTCAAAAGATCACAAGCCTAACCTTGTGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGATTCATCCATGTTGGACGGGTCAATGGAAGTTTAAAC TTGGCTAGGGCAATTGGAGACATGGAATTCAAACAGAACAAGTTTCTGCCTGTTGAAAAGCAGATTGTGACTGCAGATCCAGACATAACCTCAATTGAGC TTTGCGATGATGACGAGTTTCTTGTACTAGCTTGTGATGGGATATGGGATTGCATGTCAAGTCAACAGCTTGTGGATTTTATACATAGACAGTTAAAAAC AGAGAATAAACTTTCTGCGGTCTGTGAGAAAGTATTTGATAGTTGCTTGGCACCAGCAGTTGGTGGTGAGGGGTGTGATAACATGACCATGATTTTGATT CAGTTCAAGGATCCTTCAAATCCCAGCGCTCCCGTCACAAACCAGCCTCAGTCATCCACCGAATCGTCCAAAGCTGATACGGGTGAAGAGAAAGCAGAAT AAAACTGAGAAAGAAATCGGACAACATCTGAAGCATCGATGGGCAGGGTTCATGGATACTGTTCTGTATCCAGATTTCAGGATGTTGATTAGGGGATTGT AAATTTGTGAATGAACATGATATTGACTTTGTACATAAGTGTGTTTAGCATATGAAAGGAAAACAATGGTTCAACAAGCATACTAGCACACAGTTACATG GATGGGTAAAATCACTGTGCAAACTTACCATTGCCAATGGTAGCTACCTGAAATGTTTTCTGGAATATGGGGTCATGTTCAGTACCCATAATCTGTACAA GTTTGGTGATGATTCAGTTTTATGTATGGAATTTACAGGTAACTCTTTTTCTATAGACCCCTATAGTTGATTGATTGATGCACTTATAATTACATTATTG TTAATTTTCTATATGGCAGATGATACTGGTTAGTTTCTTGTCTGGTTCTATAGATGTTAGTTTATATGCTAATAACATTTTGAAAATGAGGAAAGGATCT TGATAGAATCTCAAGTGAC BLAST |
Tissue | flowers |
Gene name | LI_gene_58618; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61668
Blastp | Probable protein phosphatase 2C 11 from Oryza sativa with 69.53% of identity |
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Blastx | Probable protein phosphatase 2C 11 from Oryza sativa with 70.43% of identity |
Eggnog | Phosphatase(COG0631) |
Kegg | Link to kegg annotations (4328505) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456350.1) |
Pfam | Protein phosphatase 2C (PF00481.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |