| Id Trinity | FTRINITY_DN56261_c0_g4_i4 |
|---|---|
| Name Transcript | Ll_transcript_59517 |
| Sequence | ATGATGTGATGACAGTATATAAAATTCATACACTCAGTGCATACATCTTTTTCTCATAATGAAATATTTATTTATATAAATATCTGACATACAAATTCAG AACCATTTCTTTCTTTCCTTCGTTCTCTTCTTAAGGTTAATTTTCACACCTGGAACTTAGCAGTTAGTCGGTTACTACAGGAACTGGGATCTCATTTAAC CGAGTTTGTGATCTGTTCATTAAGATGGAGTTGGGTAGCATCAAGGATGCATTTGACCGTGTAGCCAAGAAGCAAAAGGTATCCTCTTCCAAGTCTCAAG AGGTCGTGGATCAGGTAGGGCGTGAAATTGAGCAGGCATTGGCAACAATTCAGTCACCACATGACCGCTCAACTCCGGTTGACCAGAAATCAGTTCTTAC AGATCTGAAGGTTAAACTTGATGCTATTGGAGCACTAAAACAGCTAGAAGGATCACAAAAGGAATTGAACACAAGTCTTACCAAGTACCAAAAACTCCTT GAAAAATTGTTAAACCCTGACATATCAAAGGCATACAGAAATGTTGACTTTGATACTCACCTTGTGAATCAGATCATCGCAACCCACTTCTACCATCAAG GTTTATTAGATCTTGGAGATAGCATCATAAATGAGGCTGGAGAGTCTGATGAGTTAGATGCAACTACATTAAAATATGAGTTCTTGGAAATGCATCAGAT TATTGAAGCTATGAAGAAAAGAAACATTGAGCCTGCTCTCAATTGGGTCACTGACAATAGAGATAAACTCGTTCAGATCGGTTCTAATCTGGAGCTCAAG ATTCACAGACTGCAGTTTTTAGAGGTCCTGCAAAATGGAACCCGAGCTGATGCCTTAAAATATGCCCGCACTTATCTTGCTCCTTTTGCTTCTCTCAACA AGGATGAGTTTCAAAAGCTTATGGGCTGCCTCTTGTATGCAGGAAGGCTTGAAAGCTCTCCCTATTCTGAGTTGCTGTCCCCAATTCATTGGGAGATGAC AACTGAAGAGCTGGTGCGGCAGTTATGCACTCTCTTGGGGCAGTCCTACCAGAGTGCGCTGAGTGTGGCATTTGCAGCCGGAGTGGAGGGGTTGCCTACA CTCTTAAAGATGGCAAATGTAATGGCATCAAAGAAGCCAGAGTGGCAGGCGATGAAACAGTTGCCTGTGTCTGTTGAATTGGGTAAGGAATTTCAGTTCC ATTCGATTTTTGTTTGTCCTGTGAGTAGGGATCAAGGGAGTGAAGAGAATCCTCCAATGCTGTTACCATGTTTACATGTCCTTTGCAAGCAATCAATTAT AAAGTTATCAAAGAGCAGCACACGAACATTCAAGTGTCCATATTGTCCGGCGGAAGCTACAGTTGCACACTGCAGACAGCTGTATTTCTGATGATGTTTA TGAGTTCCTTTTATATGTTATTTCATGGATGCAGTACAGTACTTACAGCTTTATGGTTTGTATATACATGTTCATCATGATTTCATCTATTCATCTTCCC TATTAGATCAACTTACATAGCCAATTTTATGCCTCATCCTCTCTGAGCTCTAAATACTTGCATAGTTCGCTAAAGAGGAGCTCTCTGCTTCCACCAAACG GCTGTGAAATAAGCTGAAACTTGAGAGACACTCTTTCAGTTCAGTTGAGATTCTTTGTTTAACAGTTTTTCAAAATCTTCTCAACAAAGTTTTTTACCAA ACTTCTCTGATTCTTGTTGTTAAATATGATTGTTAAGCAATAGCACTTGTTGATAAATTTGATCTGTCATATAGTGTTAGAATTACCCCACCATTCCTGC TGGTCCATACTCCATAATTTGTCTTCAATCCCACTACCACCGCAAAGGGAAGAAGGAAGAGGGGTTAAATTATGAGGGAAATTTAGTTTCAGACATTATA TTTGTACAACCTCGGCAATCAGTTCCCCTTGCAGCAGAACATAGTCCAGAAGCAACCAGTGCCTACCAGTATACTTATCAGGTGCACGAGGATTTCTTGC GGTTTTGTTTCACCTAATGGGGTCTGAAGAGAATAAATATACTTATACTTACCCTCGCAAGTGCAACAAAGGAGACTGTTCAATTCGTTTCACTCAATGC GAATTACCTATTCCAAACTCATGCATGTTTGTCTTCCCTATGAATATGACAGCACAGCTATGCAGGCATTGAACATGCAGAATTTCAGATGCAGGTACAA TACTCTCATAAACTAATAAATTTTCATGGATATATCTAACCTCATAGTCTCATATATAGTGGCAAATCTGGTTGGAAGATGTAGATGAGTGAGTTGGTTC ATGTAATTCCCTATGACCCGAGCATGAGGTAATTGGAGTCCATGTGACTATAAGTATATAAAATACAAGTAGTCACAAAACTCTATTATTAATGTAGAGT ATAGTCAATGCATATACGTAACTCTCTTATCCCTTCAATCAATAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58644; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_59517
| Blastp | Protein RMD5 homolog A from Xenopus with 35.89% of identity |
|---|---|
| Blastx | Protein RMD5 homolog A from Xenopus with 34.36% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (444705) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419758.1) |
| Pfam | CTLH/CRA C-terminal to LisH motif domain (PF10607.8) |
| Rfam | - |
| GO | - |