| Id Trinity | FTRINITY_DN56270_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_60293 |
| Sequence | GTTGTTACTTCCTCTCTATATGTTTCAGTGTTTTGTTATTTGTTCTCAAAGTGTGAGAGATTTTTGCGCTCTTGTTTCTTCTGGTTTTCTTTCCTTCACT GCTTAAAGCTACAACAGTTGCGGCAACAGAAGAGGAAGATAAACTCAGAAACATAGACTCATAGATAGTAACTCTTAAGAGCTATAGTTACAGAAATTTC TGTGATTTCAATCACAAAGAGAAAGGAAAAGTGGAGTAGAATAGAGTAGGTGATAGACCGCAGAATCTTACAGAGTCACACAAAAAAAAGAACACACTTG GTTTGTGTTTTTTGTGTGTTCACTTTTCATTCGTTTGTTGTGTTTTTTTTTGCTTTATGTTCTGTTGTTTTGTGCGGTCTATCTAACCCCCTTTTACTCT TCTATTCACTTCTCACCCCTTCAAGTTTCAATTTTTCTTTCATTTTTCGATACCCCATTATGTTTTTTCAATCAAAGTTTGTGTTTTTAGCTTAATCAAA TCAAGGGTCCATTGTATTTTCTTTTTTTCACTACCCCATTTTTGTTTTTTGGTAAAAGTTTTTGTTTTTAGCATAATCAAATCAAAGGGGGTGTTGTTGT GGCCATGGATGGTGTGAATAATAGTAATAATATTAGGGTTTGTCCTAATGGTGATGACCCAGTTGTTGGTGATGGTTCTTATTGGGTGGATGCATGTGAT GATTTCATTGATTTTGATGTTTCATCAATTGTTGTCACATCCTCTTGTCCAGACCAGCCTGATAACTCTTCCAATCAAGATTTCTTTGGTGGTATTGATC AAATCCTAGATAGTATCAAAAACGGATGTGGCCTCCCACTTGATGATAATGTTGTTGATGTTGTTGTTCACTCTGATTCCAATTCCAATCTTACTGTACC AATATCAACAACACCAACACCATTGTTATCTAATGATGCCTCTTCCAAGTTACAGTCCTTGACCTCAAGTGAAGATGGTTTTGTTAAGAATAATGGATTA TCGGTTGGAGAGAAACATGGTAGTGATGAGATTAATGGGTGTAATAAGGTGTTAAACGGCGATGAAGGGGGGATTGTGGTTGGTTATTCTGAGGAGGGTA GAGGTTTAAATAGATGCCGCGATTTGGTAAAGGAACATGATGTTGATGGCGGCGAAGAAAGGTACAGCAAAAGGGCCAGACTTGGGAACTATAAAAATGA GAGACATTATTCTGGTAGAGTGAATTATCAAGCCAAGGAGAGGGATAGGTGTTTGAGTAGGAAGAGACCACGCGATAGGGATGAGATTGATAGGAGGGAG AGGGATAAAGATGGTGTTAGGAAAAGAGAACATTGTGGTGCAAGGAGAGATGTTAGGGATAGGGATTGGAGGGATAGAGAATCAAGGGGTTATTGGGAGA GGGACAAGTCAGGCACCAATGATATGGTCTTTCGCACGGGCAGTTGGGAGGCCGATCGTACCCGAGAAGAGAATATGGCGAATGATGCGAAGCAGGAAAG TAATGTAAAGGTTGAGAAGACAGACGAGGAGACTAAGGAGAAGGCTAAGGAGAAGGTTCCTGAGGAAAAAGCTAGACAGTATCAGTTGGATGTTCTTGAG CAGGCAAAGAATAAAAACACTATAGCTTTTCTTGAAACTGGAGCAGGGAAGACCCTAATTGCTGTTCTTCTAATTAGAAGTATACATGAGAGTTTACAAA ATCAAAACAAGAAAATGCTTGCAGTATTTTTAGTTCCAAAGGTTCCACTTGTTTATCAGCAAGCAGAAGTGATTCGTGAGCGGACTGGTTATCACGTTGG CCACTATTGTGGAGAAATGGGACAGGATTTTTGGGATGCTCGAAGGTGGCAGCGTGAATTTGACAGCAAACATGTTTTAGTCATGACTGCTCAAATTCTT TTGAACATTTTGAGACATAGCATAATAAAAATGGAAGGAATCAATCTCTTGATTCTCGATGAGTGCCATCACGCTGTGAAGAAGCATCCATACTCACTGG TGATGTCTGAGTTCTACCATACTACACCCAAAGAGAAGAGGCCAACTGTATTTGGAATGACTGCTTCCCCTGTTAATTTGAAAGGTGTCTCTAGCCAAGT AGATTGTGCAATAAAAATCCGTAATCTTGAAAGTAAGCTAGATTCAATAGTTTGTACCATTAAAGATCGCAAGGAGCTGGAGAAACATGTGCCAATGCCC TCTGAAGTTGTGGTGGAGTATGACAAAGCGGCCAGTTTATGTTATCTACATGAACAGATAAAGCAGATGGAGCTTGAAGTTGAAGAAGCTGCGAAGTCTA GTTCAAGAAAAAGTAAATGGCAGTTTATGGGGGCTAGAGATGCTGGAGCTAAGGAAGAGCTGCGCCAAGTATACGGTGTTTCTGAAAGAACGGAAAGTGA TGGAGCTGCAAACCTAATACAGAAATTGAGAGCTATCAATTATGCACTTGGTGAACTGGGGCAGTGGTGTGCATATAAGGTTGCACAAGCCTTTTTAGCA GCTTTGCAAAATGACGAAAGGGCAAACTACCAACTTGATGTCAAGTTTCAGGAATCTTATCTTAGCAAAGTTGTCTCTCTTCTGAAATGTCAACTTTCAG AGGGTGCAGCTTCAGACAAAAATGCTGGAGTTGATGACTCAGAGTGTGGTGCGGTTCAGCAAAGTGGATCTGAGCCTGAAGAGATCGAAGAAGGAGAGCT TCTAGACAGTCATGTTGTCTCTGGCGGGGAACACGTGGATGTCATAATAGGAGCTGCTGTCGCTGATGGCAAGGTGACCCCCAAGGTGCAGGCGCTGATC AAAATACTTCTCAAGTATCAGCATACTTCTGACTTCCGAGCAATTATCTTTGTTGAGCGTGTTGTGTCTGCGTTAGTTCTACCCAAGGTCTTCGATGAGC TTCCATCTCTTGGTTTTGTGAAGTGTGCAAGCTTGATTGGTCACAACAATAGTCAGGAAATGCGGACTCACCAAATGCAGGATACAATTGCTAAGTTCCG TGATGGGCGGGTTACATTGTTAGTTGCAACTAGTGTTGCTGAAGAAGGACTTGATATCCGGCAATGCAATGTTGTTATTCGCTTTGATCTTGCGAAGACT GTTCTGGCATACATTCAGTCCAGGGGCCGTGCTAGAAAGCCTGGGTCTGATTACATTCTGATGGTTGAGAGGGGAAATTTGTCACATGAAGCATTTCTAA AGAATGCCAGGAACAGTGAGGAGACATTGCGCAAAGAAGCAATACAGAGAACAGACCTTAGTCACCTGAAAGATACTTCAAGGTTAATAACAGTAGAAAC CCGGCCCGGATCGGTTTACCAGGTGGAGTCAACTGGTGCAGTCGTGAGCTTAAATTCTGCTGTAGGTCTTATCCACTTTTTCTGCTCTCAGCTGCCTAGT GACAGGTATTCGATCCTTCGTCCCGAGTTTATTATGGAGAAGCATGAGAAAGAAGGAGGTCATACTGAATATTCTTGCAAGCTTCAACTGCCGTGTAATG CGCCATTTGAAAATCTTGAGGGTCCTATCTGCTGTTCGATGCGATTGGCACAACAGACTGTTTGTCTGGCCGCTTGCAAGAAACTACATGAGATGGGAGC ATTCACTGACATGCTACTGCCTGATAAAGGAAGTGGAGGAGAAAAAGAAAAGACTGAGCAAAATGATGAAGACGAACCACTTCCAGGGACTGCTAGACAT AGGGAGTTCTATCCTGAAGGTGTTGCTGACATACTAAAGGGAGAATGGATCTTATCTGGAAAAGATGCTTGCAAAGACACCAAAGTGCTGTATCTTTGTA TGTATGCCTTGAAGTGTGAAAATGTAGGCGATTCGAAGGATCCGTTCTTGACTCAAGTTTCAGAGTTTGCAGTACTGTTTGGCAATGAGCTGGATGCAGA GGTGTTATCGATGTCAATGGATCTATTTATCGCTCGAACCGTAACTACAAAGGCATCTCTTGTCTTTAGAGGGATGGTAGATATCACCGAGAGTCAGTTG GCGTCCCTGAAAAGCTTTCATGTAAGGTTAATGAGCATTGTCTTGGATGTGGATGTTGAACCATCTACCACTCCTTGGGATCCTTCAAAAGCATATTTGT TTGTCCCAATGGTTGGCGATAATTCTGTAGATCCGGTGAAACAAATTGACTGGCATCTGGTTGAGACAATAATTGGAGCAAATGCATGGAAAAATCCATT GCAAAGAGCTCGACCGGATGTTTACCTTGGTACTAATGAGAGAACTTTAGGGGGAGACAGAAGGGAGTATGGATTTGGGAAATTACGTCATGGCATGGCC TTCGGTCAAAAGTCACATCCAACCTATGGAATCAGAGGAGCGGTGGCCCAGTTCGATGTGGTGAAGGCTTCAGGATTAGTTCCTGACAGAGATGCCTTGC AAAAACAAAAGAATAATATCAATTTGACTAGCAAAGGAAAATTGATGATGGCGGATACCTGTGCTGATGCAGAGGATCTAGTAGGAAAAATTGTAACTGC TGCTCACTCCGGGAAGAGGTTTTACGTTGATTCAATACGCTATGAAATGTCCGCAGAGAACTCTTTCCCTAGGAAAGAAGGTTATCTTGGTCCTCTAGAG TACAGTTCATATGCCGATTACTACAAGCAAAAGAAGAACAAGGAGCTAATCTTTAATCTGTGAAGGAACCTTTTATTGCCACCTCTTAATTATATGGGAT TTATCAGTGTGTCCCATGTAGGTGACAATAGCTTGACGGATCCTTCTAGATTAGAGAAGCTTCTTGTCTCTTCTTGTGCAACGAAGGGTGCATATGGCTA CTTTATTGCATTGGTGTAGGTATGGAGTTGAATTGATTTACAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTATCATACTGCAAGAATCTTCTGTCTCC TCGATTTGAACACGGTGAAGCAAATGAAGGTGAATCTGATGAGGCTCATGACAAAACTTATTACGTTTTCCTTCCTCCTGAGCTATGCCTACTACACCCA CTGCCGGGATCACTTGTTCGTGGTGCTCAGAGGTTGCCTTCAATAATGAGGAGGGTTGAAAGTATGCTTCTTGCGGTTCAGCTGAGGGATATGATAAATT ATCCTGTCAAGGCTTCAACGATCTTGGAAGCCTTGACCGCAGCATCTTGCCAAGAGACATTCTGCTATGAAAGAGCTGAGCTTCTTGGTGATGCTTACTT GAAATGGGTCGTTAGTCGGTTTCTTTTCCTAAAATATCCCCAGAAACACGAAGGCCAGCTTACAAGGATGAGGCAACAGATGGTCAGCAACATGGTATTG TATCATTTTGCATTAAGTAAAGGGCTCCAATCGTATATTCAAGCAGATCGCTTCGCCCCATCCAGATGGGCAGCTCCCGGAGTGCTACCTGTCTTCGATG AGGATACCAAGGATGGGGAGTCATCTTTATTTGACCAAGAGAAATCCATTTCCAAGACCGAGAAGATGGATTCTCACACTGATGGATATGAGGATGAAAT GGAAGATGGTGAACTTGAGAGTGATTCAAGTTCATACAGAGTTCTGTCCAGCAAAACACTCGCAGATGTTGTGGAAGCACTGATCGGTGTGTATTATGTT GAAGGTGGTAAGACTGCTGCTAACCACTTCATGAGCTGGATTGGCATTCAGATAGAGTTTGATCCTGATGAGATTGAATGTGCAAGAAATCAATTTAGTA TTCCAGAGGGCATACTAAGGAGTGTTGATTTTGATGGTTTAGAAGGTGCTTTGAATATCAAGTTTAAGGATAAGGGTCTGCTTATAGAAGCCATAACTCA TGCCTCCAGACCATCGTCAGGAGTATCCTGTTATCAGCGGCTGGAGTTTGTCGGTGATGCAGTGCTGGACCATCTTATTACCAAGCATTTGTTTTTCACT TACACAAATCTCCCACCAGGACGTCTCACTGACCTTCGTGCTGCTGCTGTCAACAATGAAAATTTCGCACGTGTTGCAGTTAAACACAATCTCCATGTCC ATCTCCGACATGGTTCCAGTGCCCTAGAAAAACAGATTAGAGAATTTGTGAAGGAAGTTCAAGATGAATTGTCAAAGCCAGGGTTTAACTCCTTTGGTCT CGGAGATTGCAAAGCTCCCAAGGTCCTTGGTGACATTGTTGAGTCTATTGCTGGTGCCATCTTTCTTGACAATGGGAGGGACACTACTTCTGTTTGGAAG GTATTCCAACCACTTTTGCACCCTATGGTTACACCAGAGACTCTGCCAATGCATCCCGTGCGCGAGCTGCAAGAGCGATGCCAGCAGCAGGCCGAAGGGT TAGAATATAGAGCAAGCCGTGCTGGTAATTTGGCCACAGTTGAAGTATTCATTGATGGTGTTCAAGTAGGGGCTGCCCAAAATCCACAGAAGAAAATGGC GCAGAAATTAGCAGCCAGAAATGCCCTTGCTGCATTGAAAGAAAAGGAAGAGATAAAAGCACAGGAGAAGAATGATGAAAATGGGAAAAAGAATGGAAGT CACACATATACAAGACAAACATTAAATGATATCTGTTTGAGGAAAAATTGGCCTATGCCATTCTACAGGTGTGTGAATGAAGGTGGTCCAGCACATGCAA AGAGGTTTACATTTGCTGTGCGTGTGAATACTACTGATAAAGGATGGACTGATGAATGTATTGGAGAGCCAATGCCAAGTGTTAAGAAAGCCAAAGACTC TGCTGCTGTTCTTCTCTTAGAACTCCTAAATAAATTATATTCTTGAAAAAAGATTAATGTATTTGATCTAGTTACTGTGTTGTAGAATGTGTTGAATGAT TGTAACAATGTAGTACCTATCTATTAGTCACATGCACAAATGAGATCATAAGTAGAGTTTACTGTTGGTTGGTTCTTTATTTTGTAATACTATCTTTTAT CGAATCAATATAATATTGATTTAGTCTTAATAATTATGGTGGACTTAAGGGGGAGATGATCAGAAAGTGTGATATCCATAGCTGAAAAGAGAGATTGTTG CGTTTGTTGTATGAAGTCTCATATTGAATACGAGGGAGGAGTGAAATAGTTTATAAGTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58717; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_60293
| Blastp | Endoribonuclease Dicer homolog 1 from Arabidopsis with 69.61% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 1 from Arabidopsis with 68.64% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT1G01040) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432886.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |