| Id Trinity | FTRINITY_DN56270_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_60296 |
| Sequence | GTTGTTACTTCCTCTCTATATGTTTCAGTGTTTTGTTATTTGTTCTCAAAGTGTGAGAGATTTTTGCGCTCTTGTTTCTTCTGGTTTTCTTTCCTTCACT GCTTAAAGCTACAACAGTTGCGGCAACAGAAGAGGAAGATAAACTCAGAAACATAGACTCATAGATAGTAACTCTTAAGAGCTATAGTTACAGAAATTTC TGTGATTTCAATCACAAAGAGAAAGGAAAAGTGGAGTAGAATAGAGTAGGTGATAGACCGCAGAATCTTACAGAGTCACACAAAAAAAAGAACACACTTG GTTTGTGTTTTTTGTGTGTTCACTTTTCATTCGTTTGTTGTGTTTTTTTTTGCTTTATGTTCTGTTGTTTTGTGCGGTCTATCTAACCCCCTTTTACTCT TCTATTCACTTCTCACCCCTTCAAGTTTCAATTTTTCTTTCATTTTTCGATACCCCATTATGTTTTTTCAATCAAAGTTTGTGTTTTTAGCTTAATCAAA TCAAGGGTCCATTGTATTTTCTTTTTTTCACTACCCCATTTTTGTTTTTTGGTAAAAGTTTTTGTTTTTAGCATAATCAAATCAAAGGGGGTGTTGTTGT GGCCATGGATGGTGTGAATAATAGTAATAATATTAGGGTTTGTCCTAATGGTGATGACCCAGTTGTTGGTGATGGTTCTTATTGGGTGGATGCATGTGAT GATTTCATTGATTTTGATGTTTCATCAATTGTTGTCACATCCTCTTGTCCAGACCAGCCTGATAACTCTTCCAATCAAGATTTCTTTGGTGGTATTGATC AAATCCTAGATAGTATCAAAAACGGATGTGGCCTCCCACTTGATGATAATGTTGTTGATGTTGTTGTTCACTCTGATTCCAATTCCAATCTTACTGTACC AATATCAACAACACCAACACCATTGTTATCTAATGATGCCTCTTCCAAGTTACAGTCCTTGACCTCAAGTGAAGATGGTTTTGTTAAGAATAATGGATTA TCGGTTGGAGAGAAACATGGTAGTGATGAGATTAATGGGTGTAATAAGGTGTTAAACGGCGATGAAGGGGGGATTGTGGTTGGTTATTCTGAGGAGGGTA GAGGTTTAAATAGATGCCGCGATTTGGTAAAGGAACATGATGTTGATGGCGGCGAAGAAAGGTACAGCAAAAGGGCCAGACTTGGGAACTATAAAAATGA GAGACATTATTCTGGTAGAGTGAATTATCAAGCCAAGGAGAGGGATAGGTGTTTGAGTAGGAAGAGACCACGCGATAGGGATGAGATTGATAGGAGGGAG AGGGATAAAGATGGTGTTAGGAAAAGAGAACATTGTGGTGCAAGGAGAGATGTTAGGGATAGGGATTGGAGGGATAGAGAATCAAGGGGTTATTGGGAGA GGGACAAGTCAGGCACCAATGATATGGTCTTTCGCACGGGCAGTTGGGAGGCCGATCGTACCCGAGAAGAGAATATGGCGAATGATGCGAAGCAGGAAAG TAATGTAAAGGTTGAGAAGACAGACGAGGAGACTAAGGAGAAGGCTAAGGAGAAGGTTCCTGAGGAAAAAGCTAGACAGTATCAGTTGGATGTTCTTGAG CAGGCAAAGAATAAAAACACTATAGCTTTTCTTGAAACTGGAGCAGGGAAGACCCTAATTGCTGTTCTTCTAATTAGAAGTATACATGAGAGTTTACAAA ATCAAAACAAGAAAATGCTTGCAGTATTTTTAGTTCCAAAGGTTCCACTTGTTTATCAGCAAGCAGAAGTGATTCGTGAGCGGACTGGTTATCACGTTGG CCACTATTGTGGAGAAATGGGACAGGATTTTTGGGATGCTCGAAGGTGGCAGCGTGAATTTGACAGCAAACATGTTTTAGTCATGACTGCTCAAATTCTT TTGAACATTTTGAGACATAGCATAATAAAAATGGAAGGAATCAATCTCTTGATTCTCGATGAGTGCCATCACGCTGTGAAGAAGCATCCATACTCACTGG TGATGTCTGAGTTCTACCATACTACACCCAAAGAGAAGAGGCCAACTGTATTTGGAATGACTGCTTCCCCTGTTAATTTGAAAGGTGTCTCTAGCCAAGT AGATTGTGCAATAAAAATCCGTAATCTTGAAAGTAAGCTAGATTCAATAGTTTGTACCATTAAAGATCGCAAGGAGCTGGAGAAACATGTGCCAATGCCC TCTGAAGTTGTGGTGGAGTATGACAAAGCGGCCAGTTTATGTTATCTACATGAACAGATAAAGCAGATGGAGCTTGAAGTTGAAGAAGCTGCGAAGTCTA GTTCAAGAAAAAGTAAATGGCAGTTTATGGGGGCTAGAGATGCTGGAGCTAAGGAAGAGCTGCGCCAAGTATACGGTGTTTCTGAAAGAACGGAAAGTGA TGGAGCTGCAAACCTAATACAGAAATTGAGAGCTATCAATTATGCACTTGGTGAACTGGGGCAGTGGTGTGCATATAAGGTTGCACAAGCCTTTTTAGCA GCTTTGCAAAATGACGAAAGGGCAAACTACCAACTTGATGTCAAGTTTCAGGAATCTTATCTTAGCAAAGTTGTCTCTCTTCTGAAATGTCAACTTTCAG AGGGTGCAGCTTCAGACAAAAATGCTGGAGTTGATGACTCAGAGTGTGGTGCGGTTCAGCAAAGTGGATCTGAGCCTGAAGAGATCGAAGAAGGAGAGCT TCTAGACAGTCATGTTGTCTCTGGCGGGGAACACGTGGATGTCATAATAGGAGCTGCTGTCGCTGATGGCAAGGTGACCCCCAAGGTGCAGGCGCTGATC AAAATACTTCTCAAGTATCAGCATACTTCTGACTTCCGAGCAATTATCTTTGTTGAGCGTGTTGTGTCTGCGTTAGTTCTACCCAAGGTCTTCGATGAGC TTCCATCTCTTGGTTTTGTGAAGTGTGCAAGCTTGATTGGTCACAACAATAGTCAGGAAATGCGGACTCACCAAATGCAGGATACAATTGCTAAGTTCCG TGATGGGCGGGTTACATTGTTAGTTGCAACTAGTGTTGCTGAAGAAGGACTTGATATCCGGCAATGCAATGTTGTTATTCGCTTTGATCTTGCGAAGACT GTTCTGGCATACATTCAGTCCAGGGGCCGTGCTAGAAAGCCTGGGTCTGATTACATTCTGATGGTTGAGAGGGGAAATTTGTCACATGAAGCATTTCTAA AGAATGCCAGGAACAGTGAGGAGACATTGCGCAAAGAAGCAATACAGAGAACAGACCTTAGTCACCTGAAAGATACTTCAAGGTTAATAACAGTAGAAAC CCGGCCCGGATCGGTTTACCAGGTGGAGTCAACTGGTGCAGTCGTGAGCTTAAATTCTGCTGTAGGTCTTATCCACTTTTTCTGCTCTCAGCTGCCTAGT GACAGGTATTCGATCCTTCGTCCCGAGTTTATTATGGAGAAGCATGAGAAAGAAGGAGGTCATACTGAATATTCTTGCAAGCTTCAACTGCCGTGTAATG CGCCATTTGAAAATCTTGAGGGTCCTATCTGCTGTTCGATGCGATTGGCACAACAGACTGTTTGTCTGGCCGCTTGCAAGAAACTACATGAGATGGGAGC ATTCACTGACATGCTACTGCCTGATAAAGGAAGTGGAGGAGAAAAAGAAAAGACTGAGCAAAATGATGAAGACGAACCACTTCCAGGGACTGCTAGACAT AGGGAGTTCTATCCTGAAGGTGTTGCTGACATACTAAAGGGAGAATGGATCTTATCTGGAAAAGATGCTTGCAAAGACACCAAAGTGCTGTATCTTTGTA TGTATGCCTTGAAGTGTGAAAATGTAGGCGATTCGAAGGATCCGTTCTTGACTCAAGTTTCAGAGTTTGCAGTACTGTTTGGCAATGAGCTGGATGCAGA GGTGTTATCGATGTCAATGGATCTATTTATCGCTCGAACCGTAACTACAAAGGCATCTCTTGTCTTTAGAGGGATGGTAGATATCACCGAGAGTCAGTTG GCGTCCCTGAAAAGCTTTCATGTAAGGTTAATGAGCATTGTCTTGGATGTGGATGTTGAACCATCTACCACTCCTTGGGATCCTTCAAAAGCATATTTGT TTGTCCCAATGGTTGGCGATAATTCTGTAGATCCGGTGAAACAAATTGACTGGCATCTGGTTGAGACAATAATTGGAGCAAATGCATGGAAAAATCCATT GCAAAGAGCTCGACCGGATGTTTACCTTGGTACTAATGAGAGAACTTTAGGGGGAGACAGAAGGGAGTATGGATTTGGGAAATTACGTCATGGCATGGCC TTCGGTCAAAAGTCACATCCAACCTATGGAATCAGAGGAGCGGTGGCCCAGTTCGATGTGGTGAAGGCTTCAGGATTAGTTCCTGACAGAGATGCCTTGC AAAAACAAAAGAATAATATCAATTTGACTAGCAAAGGAAAATTGATGATGGCGGATACCTGTGCTGATGCAGAGGATCTAGTAGGAAAAATTGTAACTGC TGCTCACTCCGGGAAGAGGTTTTACGTTGATTCAATACGCTATGAAATGTCCGCAGAGAACTCTTTCCCTAGGAAAGAAGGTTATCTTGGTCCTCTAGAG TACAGTTCATATGCCGATTACTACAAGCAAAAGTATGGAGTTGAATTGATTTACAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTATCATACTGCAAGA ATCTTCTGTCTCCTCGATTTGAACACGGTGAAGCAAATGAAGGTGAATCTGATGAGGCTCATGACAAAACTTATTACGTTTTCCTTCCTCCTGAGCTATG CCTACTACACCCACTGCCGGGATCACTTGTTCGTGGTGCTCAGAGGTTGCCTTCAATAATGAGGAGGGTTGAAAGTATGCTTCTTGCGGTTCAGCTGAGG GATATGATAAATTATCCTGTCAAGGCTTCAACGATCTTGGAAGCCTTGACCGCAGCATCTTGCCAAGAGACATTCTGCTATGAAAGAGCTGAGCTTCTTG GTGATGCTTACTTGAAATGGGTCGTTAGTCGGTTTCTTTTCCTAAAATATCCCCAGAAACACGAAGGCCAGCTTACAAGGATGAGGCAACAGATGGTCAG CAACATGGTATTGTATCATTTTGCATTAAGTAAAGGGCTCCAATCGTATATTCAAGCAGATCGCTTCGCCCCATCCAGATGGGCAGCTCCCGGAGTGCTA CCTGTCTTCGATGAGGATACCAAGGATGGGGAGTCATCTTTATTTGACCAAGAGAAATCCATTTCCAAGACCGAGAAGATGGATTCTCACACTGATGGAT ATGAGGATGAAATGGAAGATGGTGAACTTGAGAGTGATTCAAGTTCATACAGAGTTCTGTCCAGCAAAACACTCGCAGATGTTGTGGAAGCACTGATCGG TGTGTATTATGTTGAAGGTGGTAAGACTGCTGCTAACCACTTCATGAGCTGGATTGGCATTCAGATAGAGTTTGATCCTGATGAGATTGAATGTGCAAGA AATCAATTTAGTATTCCAGAGGGCATACTAAGGAGTGTTGATTTTGATGGTTTAGAAGGTGCTTTGAATATCAAGTTTAAGGATAAGGGTCTGCTTATAG AAGCCATAACTCATGCCTCCAGACCATCGTCAGGAGTATCCTGTTATCAGCGGCTGGAGTTTGTCGGTGATGCAGTGCTGGACCATCTTATTACCAAGCA TTTGTTTTTCACTTACACAAATCTCCCACCAGGACGTCTCACTGACCTTCGTGCTGCTGCTGTCAACAATGAAAATTTCGCACGTGTTGCAGTTAAACAC AATCTCCATGTCCATCTCCGACATGGTTCCAGTGCCCTAGAAAAACAGATTAGAGAATTTGTGAAGGAAGTTCAAGATGAATTGTCAAAGCCAGGGTTTA ACTCCTTTGGTCTCGGAGATTGCAAAGCTCCCAAGGTCCTTGGTGACATTGTTGAGTCTATTGCTGGTGCCATCTTTCTTGACAATGGGAGGGACACTAC TTCTGTTTGGAAGGTATTCCAACCACTTTTGCACCCTATGGTTACACCAGAGACTCTGCCAATGCATCCCGTGCGCGAGCTGCAAGAGCGATGCCAGCAG CAGGCCGAAGGGTTAGAATATAGAGCAAGCCGTGCTGGTAATTTGGCCACAGTTGAAGTATTCATTGATGGTGTTCAAGTAGGGGCTGCCCAAAATCCAC AGAAGAAAATGGCGCAGAAATTAGCAGCCAGAAATGCCCTTGCTGCATTGAAAGAAAAGGAAGAGATAAAAGCACAGGAGAAGAATGATGAAAATGGGAA AAAGAATGGAAGTCACACATATACAAGACAAACATTAAATGATATCTGTTTGAGGAAAAATTGGCCTATGCCATTCTACAGGTGTGTGAATGAAGGTGGT CCAGCACATGCAAAGAGGTTTACATTTGCTGTGCGTGTGAATACTACTGATAAAGGATGGACTGATGAATGTATTGGAGAGCCAATGCCAAGTGTTAAGA AAGCCAAAGACTCTGCTGCTGTTCTTCTCTTAGAACTCCTAAATAAATTATATTCTTGAAAAAAGATTAATGTATTTGATCTAGTTACTGTGTTGTAGAA TGTGTTGAATGATTGTAACAATGTAGTACCTATCTATTAGTCACATGCACAAATGAGATCATAAGTAGAGTTTACTGTTGGTTGGTTCTTTATTTTGTAA TACTATCTTTTATCGAATCAATATAATATTGATTTAGTCTTAATAATTATGGTGGACTTAAGGGGGAGATGATCAGAAAGTGTGATATCCATAGCTGAAA AGAGAGATTGTTGCGTTTGTTGTATGAAGTCTCATATTGAATACGAGGGAGGAGTGAAATAGTTTATAAGTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58717; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_60296
| Blastp | Endoribonuclease Dicer homolog 1 from Arabidopsis with 73.45% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 1 from Arabidopsis with 72.8% of identity |
| Eggnog | Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571) |
| Kegg | Link to kegg annotations (AT1G01040) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432886.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |