| Id Trinity | FTRINITY_DN56275_c2_g5_i3 |
|---|---|
| Name Transcript | Ll_transcript_61205 |
| Sequence | CCCCTTCCAAATAGATAGTCCGTACTAAAATGTGCGGTAAATGTAGTTTTAGGATTTATAACTTTTTTATCTGAGGAGAGCATGTTTCACTTTTATTGGG CTGTCATTGAATATAGAATGACAGTAGTGTCATCTCAAAAAAATTTCTACTCAGAAAAGTCCGCGTTACTTCATGTCATTTTCTATCCACTTTCCGTTCC ATTTATGACCAGATCCATTCCATCTTACCTTAATTAAATTCATATATAAGAAAACCAATTAGATAAGTTTCATAACCTTCAAAGACAAACATTAAACCCT GAATTTTTTCAATGTCACAAGGAATTGGAGCTAGGATTCCTGTCCCAATACTTAAGTATGATGTTTTCTTAAGCTTTAGAGGAGAAGACACACGCCATTT CTTCACAACAAAGTTACACGCCAGGTTACAGCAAAAAGGGTTAGCAGCTTTCATTGATAATGAAAGACTCATGAGAGGTGATGTTATTTCACAAGGACTC CTTCGAGCCATAGAAGAGTCTTTGGTTTCAGTTGTTATACTCTCTGAAAATTATGCTTCCTCAACATGGTGTTTGGATGAACTCCAAAAGATTGTTGAAA TGAGGAAAGAGTCCGGGAGAGCAATTTTTCCAGTGTTTTATGCTGTTGATCCTTCTGAGGTAAGACATCAAAGGGGAAGTTTTGAAGTAGCTTTTGCTAA ACATGAAGAAGCGTATAAAGGGAATAGAGAGAAAGTTAGAAGATGGAGAGATGCTTTGGCTGATGTTGCTAACTTATCTGGATGGCATTCTAGGGAATAC AAGTAAGTTTTGATATCACTCTCTTTTTAAGTTGGGGAAGCGATTAGGATAACATTTGCGTTTAGTGCGATTATAGTTATTGCGATTATAGTTATTGCGG CCTAGCGATATGGATTGCGGTCGTTGCGATGTGAATTAGTTTATGAGTAAAAACATATTTTTGACATCGATGCAGTCTGATGCGGCCCAGTACGGTTGCT TTATGGCCTGATGCGATCCAAATGCAATCCGATGCGGTTAGATTACGACCAGTTGTAGTCGCATTACTGTGATTTAGTATCACACTGCAATTGCAGTATA ATACGGTTATCGTGGCAACCGCAATATTGCAGCCGCATCACATGATGCGCTCTCCAATTTAACACATTCTTTTCAAACAATATATCATTTGAATTGCATA AAACTTTTTATGAATTAATTTTAGGTTACTTCTACAAATGTTTATGGTATATTGTAAAGTGAGAAACTAATTAAATGAGAGATCCATGTCTATAATAATA AGTCCTTTATTAGGATAGTGTCTTGAGATTTTAAATTCACCATAACCTCTTGATCATAGTTTCGCCTAATCCATTGGTAGGTTACTTATACAATGAAAAT GTAATAATTAAAAGATTAGTATCGGTTTAATTTTGATATGTCATTCTTTGATAAGACTATCATTAAAAATATAAAAGTTATTAATAAATAAGAAGTTTAA TATATACATTTAGAATAAAGATTTTATATATAATTAGTATATCATTTATTTGTGTTATTTGTAATTAAGATTTGATGGAATGTATGAACTCTTAAAGTAT GAGTGTGTAACTTTTTTATCTGAAATAAAATAAAAATGTTAGTGTAAATTTTTTTAATTTTTTGTTTCTTTTTATAATCAACGTGGCTAAAGCAAAAAAT ATATATAATATTCTCAATCAAATCAATAATAGAGATAAGGATGAGTCTTCCACATCATGTAGGGCCGGACTGAATGGACTACCATGCTCCAAATTTGTTC GGTGGTGAGGATATTTTTCGGCTTTGTCATGGCATGTCCAAGGGTCATAAGCCAGATGGAGTGGATTAGCCTTCTGATACGTCTAATCAAGTTGTACCCA TGGTGATTAACTAGACAAAAAAACCCTCATTAAGATGTGTTCTCCCTTTAAATCAGAATCTTATAAATGAGAATATGTTTATCAAACTAAAGAGCAAGCT AAATTCCACATTTGTTTTCAAAATACATGATTAGTTAATCTTTAAAAACCCAATTGTTCTCACCTTAATCTTACTTATCTCAACCATCAAATATATAAGC ACTCTCAACCCATTCCCCACAAAGAACAATATTTGCAATACCCTTCAATTCCAAACTCCTCTCAAACCTAAATATACATATCATTTCATCCCCATCTTCA AACAATCAAACCCATCATCATTATTCTAATCTTCACTTTTCACTAGATCCACCTTGACAATCCAATAATAAATCACAACCCGAACATCATTAAGATAAGT CTAATCATCATTTGCTCCATTCAATCTTTGTTTTAATTTACATTGTTTTTTTTTTTGTTTTAATTATGATGTTGATAAGGATGAGGATCAAAATGATGGA AAGAATGAGAAGAAAGAGACGAGAGAGAAGAATATTTCAAGAGAACACAAATTGATTTTTTATATGAGGATCAAAATGATGGAAAGAATGAGAAGAAAGA GACGAGAGAGAAGAATATTTCAAGAGAACACAAATTGATTTTTTATTAGATGATCAAATTGAAATATAAAAATGAAATGAAACAAAATATTATTTTTAGC CTATGTTAATTAAATCTTTATGCTATATTTTAAAACCTGTCTCTTACCTATTTTCTATTCATTTGCTGTGATCATCAAGTGGTAGGTTTATTTATTCAAT CATTGTTGGAATAATTAAAAAGTAAAGGAAACCAATAATTTCTTTTTCATCTATGTAGCAATGATGCAGAACTCATTCAAGCCATTGTTGAAGCTGTATG GATCAATTTACGTCCCAGAGTACCATCTACCTTTCATATTCTACAAGGAGTTGATACACAAGTAGAGGACTTTGATAAAGAAGCAAGGATAGGGTTGAAT AGATACTACAACAAAGAAATAAAGTGTGTCATCCAATAAATACTACAGCAAAGAAGTAAAGTGTGTCATCCTTTGAATTTGTTGATGAAATTCTGGTTTG TTTTATCAAATAAATCTAAAGAACAAATCTTTTATATTTGCTATGTTATACTATTCTCTTTATCTCCAATAAAAAATAGTCACTTTGTCAAAACAAAAAA AATCAATTTTTATTAAAAAAAAAAGTGATCAATTTTTTTATTGATGTGACTATATTTTATTGTGACAAATAAAATGGCATATAATAGTAGATATATCAGA ATTTTGTTCAGATAAAAGTAAGGAAAATGGGACTTACTATTTCAAAGTTATGATAATTAAAATTTGAAGATTGTGCATTTAATTGGGATTTTCATGTGAA ATTGTTTCAATTCTTATTTTCCTAGTTTCATTATCTCCTTATAGCTGACTGATTACAAGGGCTTAGTGGAATTCACATTTCATGTTTCAAGATGAGACAA ATTAAAGAGGTCTGGTTGTCATATTAGTACTAAATTTAAAAAGTAAAAATGACCACACACTAAGCATCTATGTCAAATACCACCAGATTTTTAAAAATAA TCAGGACCTGAAGTTTACTTGGGGTTAGGCATAAAAGAAGGGTGCAAAGATTTTGAAGAACTTGCACTATTTATCAGGCCTAGGTGATCAATAACTTGTA CAATTTAACCACTTAATTAAGAGCCTCTCTGTTTTGTTTTTTCATACTAAAGAATCAAATTAATTAGAGCCAATATAAGCATGCTGAAGGGAATTTTTAT ATTTTCTTTGGGAACCATGTTTGGGGTAATGCTTACTCGAAGGGCACAAAATTTATTCACAATTGAAGGGATTCGTAGACTTGCTTCTTCTAGCATTGAT CCTAACAAGAAAGTTCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58766; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61205
| Blastp | TMV resistance protein N from Nicotiana with 52.11% of identity |
|---|---|
| Blastx | TMV resistance protein N from Nicotiana with 52.11% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434454.1) |
| Pfam | TIR domain (PF01582.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |