Id Trinity | FTRINITY_DN56278_c0_g1_i5 |
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Name Transcript | Ll_transcript_61723 |
Sequence | AAAAAAAAATAAGTGCTAAAAGTGTTTTGGAATCTTAAATGGGTTTTCCTGGCTTGATTTGGATTAATTGGTGTCTAAAGTGACTTTCGGATACCGAGGG TATCAAACCAAAAAACAAATATTTCACCCAGAAATTTGACTCAACTTGTAGATAGAGGCTGGGTGCAATGATGGAAGTTGTGTTATTTGGGATTTTGGAA CCAGAGGCATTGCTAAAGTGCTCGGTGACGAGGAATGTTCTTCTCCCGTAACCAGTATCTGTTGGTCAAAGTATGGCCATCAAATTCTTGTATCTGCTGT TGACAAGTCATTAACATTGTGGGATGTTATGACTGGTAAAAAAATTACAAGAATAGTTTTGCAACAAACCCCTCTACAAGCTCGTCTTCATCCAGGTTCT TCTACCCCATCTCTTTGCTTAGTATGCCCAATCTCATGCGCTCCAATGGTTGTTGACCTGAATACGGGAAATACGACCTTGCTTAAAATTTATGTCTCGG AAACATGCGATGGACCAAACCCTTCTTCACACAGTAAGTGTTTCGATGGAATTACTTCCTTCACATCAAGTGCTGCTTGTTTTAATAAGTGCGGGAATTT GGTTTATGTGGGAAACTCAAAAGGAGAAATTCTTATCATTGACTATAAAGATGGTGAAGTGTGTGCCATGGTTCCTATCTCTGGTGGCTCTGTTGTAAAG AGCATACTGTTCAGCAGAAATGGGCAGTATCTGCTCATAAATTCAAATGATCGAACAATAAGGATCTATGAAAACATTCTGCCTCTGAAGGATGAAGTCA GTGCCCTTAATGAACTAGGTGAGAATTTCAACGATCTAAATGGTGTTGAGAAGTTTAAGGCTATTGGATCAAAAAGTTTAACCTTAATTCGGGAAATTCA AGATACCATCAACAGGGTTCAATGGAAAGCGCCCTGTTTCAGTGGTGACAGTGAGTGGGTAGTTGGTGGTTCAGCTAGTAAAGGAGAACACAAGATTCAC ATATGGGATAGAGCAGGGCATCTTGTGAAAATCCTTGAAGGACCGAAGGAAGCTCTTATAGATTTAACATGGCACCCCGTATATCCTCTTGTTCTATCAG TTTCCCTGAATGGCATAATTTATATATGGGCAAAAGATTATACTGAGAACTGGAGTGCATTTGCTCCTGATTTCATAGAACTTGAGGAAAATGAAGAGTA CATAGAGCGTGAAGATGAGTTTGATCTGATTCCTGAGACTGAGAAGGTTAAAGTGTCTGATGTTAATGAAGATGAGGAAGTTGATATACTCGCCTTCGAG AAAGATGCAACATTTAGTGATTCTGATATGTCTCTAGATGAGCTCTATTTCTTGCCTGCAAGTCCTACTCGAGATGTTCCTGAAAAACAAGAGACATGTT CAAAAAGTCCTTCCAAAATGGTGGACTGCAATAATACTGGACCCTCTCCCTCAGAAGAAGCTGGACCAAATGGAAATGTGACAAATCATGCATCAACTCC ACTTCAAGATGATGCTGGAGGGCGCATGAAAAGAAAGCGGAAACCTTCAGAGAAGGTGTTGGAGTTACAAGCAGAAAAAGTTAACAAACCCCCAAAACCT ACCAAATCGGCGAAATCTAAGTGCAAATCTTCGGCTGACCAGGACAATGGTAATGGTTTTTCTGGTGACGATCCTTATGATAAGTAATTGTAGATTACCA AATCTATATTTATACATACAAGTAGATGTTTCTTTGTTAAAGCTACTTTGTCACACCATACATTTTTTCTGGCCATCCTCATCCTTGGTAGTAGAGAATA TCCCAATAGGATTGAGTTAATACAAATATTGTTGAATTGGCTAATGTTAAAATTGTTGAACATTGGTTTAGCAAATTTAAATATATTTTCAACTAATTTT AATTAGTAAATCTATTTGAAAGACACAAGTGCTATTTATATAGTAGAATAAGTCCACGGAATTGTAGCATGTGTTGACTAGGGCATAAGGCATGATGAGT GATGACTTGATGCCATCCTCACCTTCATCCGGCTTATCACCGGCTGTCTGCCCATGATCCCTTATTCAAATTCAATATAGCACCTATAGGTACATAAAAA TGTATTCTATCGATTCTTTTTAATAAATGGTTCTCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_58775; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_61723
Blastp | Protein RBL from Arabidopsis with 62.95% of identity |
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Blastx | Protein RBL from Arabidopsis with 65.55% of identity |
Eggnog | Retinoblastoma binding protein 5(ENOG410XTA2) |
Kegg | Link to kegg annotations (AT3G21060) |
CantataDB | Link to cantataDB annotations (CNT0001676) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419132.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |