| Id Trinity | FTRINITY_DN56304_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_219186 |
| Sequence | CTCATACTTGTTCCAAAACCCTTCTTCTATTCTTTCTTCTCTGTGCCGCCGTTTCCGAATCTCTCTCTCTCTCTGAAAAAATGGCAGCAGCATACGCAGT GAAACCCACTAAGCCCGGTTTGGAAGAGCCTCTAGAACAGATCCATAAGATTAGGATCACTCTTTCTTCCAAGAATGTCAAAAATCTCGAAAAGGTTTGC ACTGATTTGGTTCGTGGTGCAAAGGATAAGCATCTCAGAGTTAAGGGACCTGTGAGGATTCCAACGAAAGTTCTCAATATCACTACAAGGAAAACCCCTT GTGGAGAAGGTCTTTTTATTTTCCTTAAATTTTTAATCTTTGTTTGTTGTTGTTATGTGGTTGTTTGATTCTAATATGAAATGTTATGTTTTTAATGTTG AAATTCAAGTGGACATATTTTTTGTGGTTATCTTTGTTTTATTTGCAAATTGTAGTTTGTGTCGCGAAAAATTTGATTTGGTTTTATTTGACTGGTAACA TGTTTGCTGCTTTTAGAGATGCTAATTGATAAAGGAAGAGTTTAGGTTATTGATTTAGTTTTGCTAAGATTTGTTGATTATGTGTTGTAATTTCAATTCT AAATGTCAATGGGGTGATGCTATTGATGCGATTAGATACCGTTTGACGCATAGATGGTGAGAGGGAAAATAATGGAATATAGTTCTAGTTTTCTTTGATT TCACTATTTTAGCGGAATCCAAATGTGCCACTTTTTAACTCGTGTTATGTCATTTTTTATTTATAAAATGTATTGAACATTGAACACACCATATATGTTC TGTACTTCTGTTCATTGTTACCAAATACATGGTGCATGTACGCGATTCGTTTAGTATGTGGTATGCCACTATTTACATTATTATTGTTATGACATGACTT TCTTTAAGATGAAGCATGTACATGATACATGGAGTTTGGTACATGATATGTACGGTTAATGAGAGAATATGATAATTATGGTTCTGTTGTGTCCTGTTCA AATACCTCAACCTAATGGTACCTTAATTGTTGATTGCCTCTCACTAATCAATTGTAATTTTGTAAACTAAAAATAATTTAAACATGGTTGGGGTCATGAG TGTTGATAGCAATTTAGAGTTCCAATAGAATCATTACCCGTCAATATGTATTTCCGAATTGTTTCATTTTACATGGCTGATTTTGTTTCTTTTGTTCCGA TCCTGCTTATTATTTCAGGTACCAACACATGGGACAGGTTTGAGTTGCGTGTGCACAAGCGTGTCATCGACCTCTACAGTTCCCCCGAAGTGGTCAAGCA GATTACCTCAATCACAATTGAACCTGGTGTCGAGGTTGAGGTGACCATTGCAGATGCTTGATTTCAGTTGCATCCTACTTTGTTTTGTACTTTAGCCTCT CCTTCCCGGGAATATGTTGAGAGTCTAATACATCAGTTAATGCATTTCTTTTTGCTGTTTAATTTTTTAAGTTGATTACTCGTGCACTAGACTTGATTAT CTTTTGTTTATGGTTGAGGATATCATGAGAAATGTCGTGCTTAATATGTTTTAAAATTTTGATTTTTTAATATTTTAAGCTTTGGTTTGAAATTACTTGA TACTGTTATTGTTATTTTCCTTGCAAATCTAATCTCACCTTAGTTTTGTAGAAAATTGGTAAGATGGAGCATATACTACATTGATATTAATTTACTGTTG CAGTAAAAAAATTGTTGATGTTAATTTACTGCTTCATTGCTTGCTATAGTAAACTCTTGCTTATGGACCGAGAGAGGGGGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_58996; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219186
| Blastp | 40S ribosomal protein S20-1 from Arabidopsis with 78.65% of identity |
|---|---|
| Blastx | 40S ribosomal protein S20-1 from Arabidopsis with 81.18% of identity |
| Eggnog | tRNA binding(COG0051) |
| Kegg | Link to kegg annotations (AT3G45030) |
| CantataDB | Link to cantataDB annotations (CNT0001524) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431524.1) |
| Pfam | Ribosomal protein S10p/S20e (PF00338.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |