Id Trinity | FTRINITY_DN56325_c1_g2_i2 |
---|---|
Name Transcript | Ll_transcript_219975 |
Sequence | GAGCAATTGGAAATCAAGAATGTATCAGTTGAATAGTAACATTTGTCAAGTAATGTCTTTTTCAAAACGCCCATAGCAATTGGTAAAGACAAAGTTGTTT TGAAATGTAAACAATGATATGGTTTTTGGTTCCACTTATATAATAATAAGTTATTAATTCCAAATCAAATACATGACGATGGTTCCACCAGCGGTTCAAT CGCCGAACCCACAACTGACACAACAATTCCTTAGCTCAGTCCTCTCCCAACGCGGCCCCTCCGCCCTCCCTTATTCCGAAGACACCAAGTGGCTCATCCG CCAGCACCTCCTCTCTCTCACCACCGCCTTCCCTTCCTTAGAACCCAAAACCGCCACCTTCACCCACAACGACGGCCGCTCCGTCAACCTCCTCCAAGCC GATGGCACCGTCCCCATGCCCTACCAGGGCGTCACCTACAACATCCCCGTCGTCATCTGGCTCATGGAATCATACCCTCGCCACCCTCCCTGCGTCTACG TGAACCCCACGCGCGATATGGTTATCAAGCGCCCCCACGCTCACGTTAACCCTTCTGGCTTGGTCTCCCTCCCTTATCTCCATAATTGGATCTACCCTAG CTCCAATCTCGTTGGTCTTGTTCGCACCTTGAGTCTCACCTTCGCCGCCGATCCCCCTCTTTTTTCTCAACGCAGGGCCCCACCGCCACCCCCTTCTAAT AACCCTAACCCTACCCCCAATTTGGATTCTTTTTCATCTGGGTCTTCAAATCTGGGGGCTTTTTCATCTGGGTATTCTCGCCCTTCCATTCCTCCTAATA ATTACCCTCCTGCCCCTTATGCATCTGGTTCTGGAAGGGTTCAGCCCTCGCCGCCGCCTACGCCATCTCATCATGCCGAGGATCCGGGCGAGGTGTTTAA GCGGAACGCAATTAACAAGCTTCTGGAGATGGTACATGGTGATGTTGCTGGGTTGAGGAAGACAAGGGAGGCTGAAATGGAAGGTCTATTTAGTATGCAA GGAGTGTTGAAGCAGAGAGAGGATCAGGTTAATAAGGGTTTGAAGGGAATGCGGGATGAGATGGAAGGTTTGGAGCAGCAATTGCAGATGGTTTTGATGA ATACTGATGTTATTGAAGGATGGTTGAGAGATAATCAAGCCAAGAAATTCGGGAGTTTGGAGAATGTGGAGGATGCGTTTGAATGTGTTGATGTGCTTTC TAAGCAGACGCTCGATTGTACTGCTTCTGATTTGGCTATCGAAGATACTCTCTATGCATTGGATAAGGCGGTTCAGGTTGGGAGTGTTCCGTTTGATCAG TACTTGAGGAGTGTGAGGGCATTGTCGAGAGAACAGTTCTTTTACCGAGCTACGGTCGCCAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATA TGGCTTCTAGGAATCAACATTATGCTGTATGAAGAGGGTTTTTCGGATGGTGAAGTCGCTCGTTGTGTGTATTGGGTACAAGTTCCTATTTGTTTCTTCA CTTAAAGCTAGTAATTTATTTCTAGCCTATACCATAAACCAGGAATTTATCCGACGAAACATGGTAAACATTTGAACTTACAGCAAGTTCCTTCAAGTTC CGTTGTTCCCATCCTTGGAGTTGATGCCTGCCAAGAAATCAATGCATCCATAAAGAAACATTACCATTTATACACATCAAAGTATTTATCCAGTTCTGTT GTGCAGGCATCTTAACTTCAACCAGTTACTGTCCCTTCTCTCATAACCCTACCATTATTAACATTAACAGTAACACTCCTCTTCCCTTCAATTCTATCAT CAATAACCAACCTAGGTGTGTATATATATATACTTTACACTTTCCTATCTCAAGCTGTACTTTTTCATTTTTATTCACTCTTATTTTCTTTGTATCATCA AGGTTGGCTTGTCATAACTGGTTTTAGTTTATTCTAGAGGGTTTTATTCAGCCACTGATTTGTTGTGTTTATATCTCAAAATCCATACAGTTTAGTGCCA TCTATTAATCCCAAATATCTACATAACATCCTTAGTTACTTGTTGCTCG BLAST |
Tissue | flowers |
Gene name | LI_gene_59198; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_219975
Blastp | Protein ELC from Arabidopsis with 60.34% of identity |
---|---|
Blastx | Protein ELC-like from Arabidopsis with 56.9% of identity |
Eggnog | Tumor susceptibility gene 101(ENOG410XT2Q) |
Kegg | Link to kegg annotations (AT3G12400) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450930.1) |
Pfam | UEV domain (PF05743.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |