Ll_transcript_218639

• Id Trinity: FTRINITY_DN56332_c5_g2_i6
• Name Transcript: Ll_transcript_218639
• Sequence: GGAAAGGTGTTGATTGATTTTCCTTGAAGGAGATTCTTGTGGATAAGAAATCCCAGGTGGCAATTGTTGAGTGGAAGATGCAGATTTTGGTGCAGAGAGA GAAGATAAGGCATGTTGACCTGCTGACCCATGTGCAGTGTGCAGACCACGTGTTGCTGGCTGGTTGGGCAACATGGGGCCAACTGCAGTGGAAAGAACAG TGCGTGCAGGTAGCCGTTTGGCTTCAGCCACGCGTGGGACGCGTGTCACCTCGTCAGTGGCGTTGAGGGAGATATTTTGGGGAAATTGATTCCAGAATTT ATTGTGTGATATGGGAACCGTGGAGGCATGTTTAATGTCCTCGTTAATGAGTTGTTTTGACCCCAATATAACAATATTTCCTCCAATAATAGAATTTGAA ATCTGGGCATTTTTATTGGTGTCCTTTATAGTTGTTGTATCTTTTTTTTTTCGTGTGGCTTTGGTGTTAAAGTAGAACTTAGTAGTTTTTTTTGTTTCTT ATCTAGTGCAGACTGAGTTTTGCTTCTATCTTCTCCCTCTTCTTCACTTTCTAATTTTTTTCTTAGTTCCTCCGAATTTAATACAGGCTGAGACTGTTTA TTCATGGAAGGAGTTCCCTAAAACGGTTTAAGCTTTGATACATGAAAAATCGGATGTGCTTGAGAACCTTCCGGTAGTGCAAGTTCATATGCCACCATTC CGATACAGCGGAGTGTCTGGTAAGGCCCAAAAAACGCTTGCTCAACTATTGGTTTGCCCTCCTTACCACTGTATGTTAGCGGTACGGCTGAAGCTTCAGC CAAACTCAGTCACCGACGTTAAAAACACAGGAGATATTAAGTTCGTGCTTTGAGCTTCGTCCGAAGGTATAATCTATTATAGTCGGGGGAAGCCTTCCAT ATAGAGCTTAGAATGGAGTCATATTTGTAGATGAATGCTTAGAGGTATTGTACCAATACTCTACAAGCGACAAGAATGTGAACCACTTTTTGGGATGGTC ACTTGTGAAACACCTCATGCGAAAAAATTCCTTCCAGAAACTACTCAAGAACAATTTATCTCGATTTGACACAATAGTTCTAGGAATGTCATGAAGGCGA AAGATGTCAGCAGTAAAGCGACTGGCTAATTGTGTTGCAGTAAATCGGCTTGGCAGTTCTACAAAATGGCCATATTTGGTCAATCTATCCACCACAATCC ATATCACCGTATGCCCAAATGATGGAGGAAGGGAAGTAATGAAATCCATGAAGATGTCTTCTCAAACTCGGTGAGGCAAAGGCCAAAAGAAGGAAGCTGC CATTCTGGCCATGGTCGGTTTGAGGCCCGAATGCCCGGCTGTCGGGGTGGAGTGATATTCATAAAGTAATATGTCTCGCAACCCAATATCAGCAAATATA TAAAGTCGTGTTTTGTAGTATAACAACCCATTTTTTTCATGATAAATCTTAGTAGAGGATTTCAGAAGTTTTTCCACTAACTGTTTTCATTCTGGCGTGG AATAAAACTGAGCAAGCTGAGTCAAAATGGATGGGACCGGAGAGCTCAAGGACACTAGAATTGATTCTGATGACTGACACTGGGATAGAGCATCTGCAAC TCTATTCTCTCGCCCAGTTCCCGGACATAAGCGAAGGCAACTTGCATTCGAGTCGACAATTTCTTGCTGAAGAAGGCTATTAGGTGACCATTTTGCGACA ATACTGCTCCAATAGCTAAGGCGGATGCATCTGTCTCAACATCAAAGACAACATTGAAGTCTGGAAGGACTAATACTGGACTTTGTGTCATTTTATGTTT CATTTGTGTAAATGCATCTAGTGTTGTAGAGGACCATGTAAATTGGGACTGTTTTAATAAATTTGTGAGTGGAGCGACGTGAGAAGTGTAGTTTCGAATG AAACGACAATAGAATCCAGTCAGGCCCAAGAATCCACACAAATGTGTCAATGAGCACGGAATGGGCCACTCAACAATGGCTTGGATTTTGTCGGGGTCAG GTTGAACCCCCTAGGCTGACAAAATATGGCCCAAGTATGCAACTGACTTCACACCAAACATACACTTAGACATTTTATCATAAAATTGATGATCAGATAG CAAGTTTAAAATTAATTGTAGGTGACTAACATGCTCTTTTAGCGTGGGGCAATAAACCAATATATCATTAAAAAAACCAGCACAAACTTGCGTAAATAGG GTCACAGTAGGTCATTCATTGCAGACTGAAATGTAGATGGGGCATTTGTAAGCCCAAAAGGCATCACTAATAGTTCATAGTGCCCATCAAAAGTCGGAAA GCAGTCTTGTGCGTATCTTCTGGTCTTACCCGAATCTGGTGATATCCAGATTTCAAATCAATTTTTGAAAAGATTGAGGCGGTTCCAACTTCATCGAGAA GTTCATCAATAGTGGGAATCAGAAAACGATCCTTCACTGTAATAGCATTGCGGCTACGATAATCAACACAGAACTGCCATGTTCCATCTTTCTTTCTCAC TAACAACACCGAAGAAGAAAAATGACTTGTACTTGGGATGACAACCCCTTCATGCAACATATCAGATAACAGTTTGGTCATGTCATCTTTTTGGTGGTGT GAGTATCTATATGGTTTAACATTAACTGGTTGAGATTTGGGCAGTAGGGTAATGCAGTGATCATGTGGTCGGGAGGGAGGTAATCCTTTAGGTGAGTTGA ATATGTGGGTAAAGGAGTCTAGGATTGCTTGAATTTCTTGGTTTGTAGGGTTGGGTGAAAGAGTGTGGGTAGGCAGTGTGGAAGTTGTAGGTGGGTTTGG TTCTGGAAAGGAAATACAAAACATTTCTACAATAGAGTCGGTGTGAGAGAGTCTGCTTAGTTGGTTTAGGGAAGCTATATGTGGTGGTTGGGAATTTTGG TCTACGAGAGTAATGGTTTTGTTGTCATAATAGAAGGACATCGATGGTATAGCAAAGTCGGAGGTAATAGGTCCAAGTGTTTGTAACCACTCAATACCCA AGACCAAATCTGCCCCTTGGATAGGTAGTAAGTAGAATGGTACAAGAAAAAGTTGTTGTTGCAATTGTAGTGGAGTTTCTTTGCACACACCGGTGCAATA AATATGATCTCCATTTCCCACCATTACTGGAAATTGAGGGGTAGGAAAAATATCCAATATGAGGAACTGTGCTATTCGTAGTTGCATAACATTATGAGAA CTGCATGTGTCAACCAGCACATGAACCGGATAACCATGAATAAGACCCTGAAACTTGAGTGTCCTAGGCGAAGGATTGCCTTTGAGTGCTTGGGCAAAGA GTTGAAAATAAACCAATTCTTCAAGGTTCTCCGGTGGAGAATTTTCTATGGTGATAGTATGAGAAGAGTCCATCTGTGTTTCCAACCGTGAGTCTAGATT GCATAGCTCAGTAGGATCATCATCGGTCACAAACAAGAAAAATTATTTAGGTTGGCATTTGTAACCAAAAATGTATTTCTCATCACAGTGATAACAAAGA CCATGGGCCCTTCTTTCTTGCATCTGGGATGTTGTTAAACATTTAATGGACACTTTATTTTGTGGTGCAGAAACAAATCTAACGGTTGATGTGACGTTGT GCTGAGTAGTGGGTCTTGGAAAACGTGCCATTGGTTTTTCATCATTAATTTTACTCTCAATCAACTTAGCTAAACCCATAGGATGACTAATTGAATGAGG TTGTAAAATTGCCAATTCCCTCCGAATTTCCACTTTAAGACCAGAAATAAAACAATTTAACAACATTTAAGGGGAAAACCTACCACTTTGTTAGAAAGCT TTTCAAAGCGCCTCTGGTAATCAGTAACTGTAGTAAATTGCCTCAACTTGAACAACTCTGCTTGTGGTTATCATAAGCTGATGGACCAAAACGTTGTTGT ACGTCCCTAGTAAAATCATCTCAGGTTGTGAGTTGCTGATTTTGGAACATTCATTTATACCAATTGGGTGCTTCTCCTATCATTGAAAAAGGCATTAACT CCATACGTTTTGGAGGAGTAATCTGATATAGTTGAAAGAATTGTTCCGCCTGGAAAACTCATTCCAATGGTTCAAATCCATCAAATGAGTGAAGGTTTAA TTTTAGGGGTTTGAGATTAGAATATGGATTGGAGGTAGAAGAGTGAGTGGAGGTGGAAAATGACTGGTTAGAGAAACCAGGGGGTGGAGAAGGAGGTGGT TTAGGTTGGATATGAGATTTCAAATCTGAAATGACAAATTGTAGCTCTTCGTGTCTAGTGTTCATGGTTTGTTGCATAAGTTCTTGTCTTGCAGCAAAAT AGAGCTCCATAGAGGAGAGTTTCTCCATAATGTTGCTCAAAGGATCATCCAAGGGTTGAGAAGTGTTTTTAGGAGGCATGAGGAAGTTGAAAGCACCAAA TTGATAGAGGTTTCTATCAATGAAGTTAATAATTCTGGAAATTTAAAGAGAATAAAAGAGATTGAGCAATGCTCTAGATTTTTCATATATTCATCGATGG AAAGCTGCTCAATTTAAATACAATAAGCAAACCCTAATTATGATGTTAGCCCTACACTTGGCAACATCTTGATTTAAAGGTAAATTCTTAAAGCAAAACT AAAATAGAAGGATCTAGACAATATAATCAGTCATCCATTTAGGAGGAACTCTGGGCCTTTTACCATTAAGCTCATTCAGCCTATCATTCTCACACCAAAC ATAGCTGTTGAAATGGCAACAGTTAAAATCAAAGTCCGCCCTAATACATACTTAATCTCATGTTTACCAGTTGAGTTTTAGTAAAAAAAAAAAGAAGGAA AATGTTCAAAGTCATACCACAAAGTTCGCAAATATAGTTCACTTCCCTCGATTATCCTTTAAAAACCAATTCACAAAAGGACTCTAAAGGAAGTGTGTAG ATTACATTTAAAAAATTGGATGATATATATTACCCTTCAAAAGCCAATCCACACAGTTGAAAATTATCAAATTTATAATTTTGCTACCATGGTGAAAAGT AGGAAGTGTATACTTTTTAGTGTAATCATAATACTTTCTAATCATAAGCAAAATCAGCTACCTTACCTACAAATAGTAAAAATAAAATATGCAAAGGAGA CATGAATCTACCAAATATATCATAACACTTGCATTTAACCTAATCTTTAGTTGCTATGAGATGGGCTAAAATCCAATTCATTAGAAGTTAAAACCCACTT TACCCCCACACATGAATGGGGGCTGGAACCGCCTAAATCTCATCTTTATCTAACTAACATTGGTCCAAACCACGCTCTATAAAAACCCAGCATTGATCTA TCTCAAACAAGTTCAAACTCCAGAACAACCTTTAGTTAATTCAAGCAGGCAACTTTAGTTTTGAATTGTTCTTCCAGCTGCAAAACAAAATTCCTGATAT TACCTATTTGTTATATCAGCAAAACAGAATCATACTGAACTTAACAGATAGATATCATTACCTGATGAAGTAATAGTAGAAGAAATCAGCATATATACCC GTCTGGACAATGCCAGACACACAAGCTATCCATCGTGTAAAACGCGGCTCAGTCAGATAGCGGTATATCCAGTTCAGAATGTAAAATGCACGATATGCAC CAAGAAAGAATACGTATTGCCCAGTCAAATTGTCCACATTTCCACTTCGTTGCAACAAAACCAACTGAGGCAGTATTGCAACTGCCTCCAAGTATATTGA AAATGCCCATAAGACCTCTTGAACGGTGAAT
• Tissue: flowers
• Gene name: LI_gene_59252;
• Additional information: details;

Expression of Ll_transcript_218639

FPKM

• FPAB: 28.4
• FPNAB: 18
• LF1: 9.1
• LF2: 8.7
• LF3: 14.4
• LF4: 14.6
• UF1: 7.1
• UF2: 8.8
• UF3: 14.2
• UF4: 14.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_218639

• Blastp: Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 41.38% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 40.22% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR109W-B)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438985.1)
• Pfam: Retroviral aspartyl protease (PF08284.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;