Ll_transcript_218842

• Id Trinity: FTRINITY_DN56335_c0_g3_i2
• Name Transcript: Ll_transcript_218842
• Sequence: CGGGGAAGTAATCTCTCCTGGTCAAACTGAAAGACCACGACCACAGTAGCAACTGAACCCTTTTGTCAGCCGCTACGGTTTCTGAACTTCTATATCAAAC CACACTCTTTTCCTTCACCAACAGTAGTAGTAACATTTTTTTGTTCACTACTCAAACCCTGTGGCAACAAATCTGAAAGTTCTCTACCTCTTTCTTCTCC TACTACAGATCCATCACTTTGTTTTCTATGGCCTGAAAAGTCTTATTTTCATTTGAATTTTCTTCCTTTCTCTTTTTAAACACTTCATTTATATGTGCCA AAGAATGAGTCAGAGTCAGAGACAAAGACACCAGGGTCAAGGGTTTTAGGTGAAGAGAGAGAAAACTAGATGCAAAACAACAACACCTACCATAACCATT TTTTTCCTTCTTTCTCTATTACCCTTTAGCTTAGATAGAGTTTGGAACATATTCTCTTGATGGGTTTTGGTTAAAGTTTCTATCTTTATCATTTCCCTAG TTAGTTACTTTTATTGCCTGTATTGTTTGTCTCAATATGTTAGGTGGAGAAGAGGGTGAGGCCTCTGCCGGAGCTGGTCACCGGAGAACTTATTCCCGGT CAGTTTCATGGACTGATCGAGCTCCGTCGAGCCGAAAGCCACCGAACAAGTCAAGGTCATTGTTGCCATCACTTCAGCCACTTTCTATTAATAAACGCAG TGTTCAGGAGTGGCCAAGTGCTGGATCTGATGACCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGGTCAATCAGATCCACGGAACCGGGTGCTATG AAGGAGTTTCAGTTCAAGAGGGAGAAGCTGGCTTTCTATGACAAAGAGTGTTCTAGAATTGCTGAACATGTGTATCTCGGAAGTGACACAGTTGCAAAGA ACCATGAGCTCTTGAGGCAGAATGGGATCACTCATGTTCTTAACTGTGTTGGTTTTGTTTGCCCTGAATATTTCAAGAGTGATTTTGTGTATAAGACTCT TTGGTTGCAGGATAGTCCAACTGAGGACATCACTAGTATTCTGTATGATGTTTTTGATTACTTTGAGGATGTTAGGGAGCAAGGTGGGCGTGTCCTTGTT CATTGCTGCCAAGGGGTTTCGAGATCAACGTCGTTGGTGATTGCATATATCATGTGGAGGGAGAGTCAGAGCTTTGAAGATGCTTTTCAGTATGTGAAGA ATGCAAGAGGTGTTACCAATCCAAACATGGGTTTTGCTAGTCAACTCTTTCAGTGTCAGAAAAGGGTACATGCTATGCCTGCTAGTCCTAAATCTATTCT TAGAATGTATAGAATGGCTCCTCATTCACCTTATGACCCTCTTCATTTGGTTCCCAAAATGGTGAACCAGCCATGTGCACAAACACTTGATTGTCGTGGG GCTTTTATTATCCATGTTCCTTCTGCTATATATGTATGGACTGGTAAGAATTGTAATTGTGTCATGTCTTGTAATGCAAAGTCAGCAGCCGATCAGGTCA TACGTTATGAGAGGGCCAGAGGTCCAGTTCTTATGATCCATGAAGATGAGGAGCCACCGGATTTTTGGATTGCTCTTTCCAATGAGCAATTGTTATCAGG TAATTGTGATAAGGTTGAGGTCAAGAAGGATACAGCATTGGCTTCTTCTGAAAGAATGGAGATTGATGATGCAGTCGATAATTGGATTCGTCCAAGGAAA GTGGATGAATATGATTTGGATTTTGAGATTTTTCACAAGGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCTGTATCTAATGATGAATCAGAAACTTGCC TTCCCGCTAGAGAAAACGGTTGGGGAAGATTGAGGAGAAAGCTTGCTAGCGGTCTCATGAAAGGATTGTTCCCATCCTGCAAAAGTACAAACTCATCCAA AGGCGAATCGTGTGCAATCATGGAAGAAGAAGATGAAAAACAACACTCTGTTGTTGATCCTTCATCGCCATCATCAAACCACCCTTGTGGTTCACGGGAT TTGTTTGAGTGTTTTCCAGATAACAGCTCAGACAGGGTAAAAGATACACTTGAAGTCATGGACCACTTTGTTCCTAGCGTTGATTCATCACTGCCACCAT CTCCCGGAGGAATGTCAGATTCTTATGCTTGTTTTCTAAGCAATAGCCCAAAACTCAGTTCCAAGTCGCTGACGCTTTCACCTTCAAGTTCTGATTATGC CAGTTCATTTACATTTTCACCTTCATCAACAAACTGGTCTTCTCGGTTGCCATCACCTTCTAGCCTAGAATCAACTGAAGCCTTTTACGGTAAAGATGCA TCATCCTTAGATGGTTTCTTTTCACTTCAGAAAGAAACCGTCTCTTCACCTTCCAAGGCATATTCTGCTAACCACTTATTAAGAAGAGCAGACTTCTATT CGCGGAGTAAAGGATCTTCGCCCTCCATTGCAGAGCGCAGAGGAAACAATCTGCCACCTCACATGGTGCTACTCTCAGTCAATGAATCACCCTGCGACCA TAAGGCCCTGGTAAGGTCACAGTCATTCTCTCTACCTGATTTGGATGATAATTTGAAAAAGGATGTTAGTTCCGACGTCCAAGCAATCTGATGAAGAAGA CAGTGGAGAACCGCTAAAAACAGATGCCGAAATCATTGCAACAACTGTTGAAAGTGCGGATTATGGCAGTGGATCATTGTAGCATAGTACTGTGTTATAT AATAAGATGGTTATGCTTGAAATAGAAGAGATTAAGAGAAAATTAACTTGATTAAACAGTTCAGTTTCTTCCTTTGTAGCCTATAGTTGGAGCCCAAATG ATCTATTTTTGGAGCTGAATTTGATTATAGTAGTCTAAATTTTGGTGCATGTGCAACGTGTATGTACCATAGGCTTAGTAATAACTACACAGATAACATG CAGGCTGTGCATGATAGAATCTGAAGTACATAACAATGGCTAAACTTTGTTGGATATAAAAGCTATGTTCCTTTTCCCTTTTTCTACTTTTCTTGTTCTT GTTCATAAGAGCCACTACGCCTTATGAAAGTTGCTTCTGTTTTAGCATGAAAAGGGTCCAAAAAGGTTAACATTTGTAGGAAAATTACATAGCAGATATG ACTTTGTTACCAATGTTACCTCATCCTTTACAAGTTTATTGTTTCCATTAATTAAAATTAGTTAGTCTTTAACATTTCATTGGCATATGGTTTGTTATAT TTGCATGGTTTATATGAATGAAATCAATTATATTACTTTACCT
• Tissue: flowers
• Gene name: LI_gene_59269;
• Additional information: details;

Expression of Ll_transcript_218842

FPKM

• FPAB: 3.6
• FPNAB: 3.7
• LF1: 1.9
• LF2: 1.7
• LF3: 2.2
• LF4: 2.9
• UF1: 1.5
• UF2: 1.8
• UF3: 2.7
• UF4: 2.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_218842

• Blastp: Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 52.04% of identity
• Blastx: Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 57.39% of identity
• Eggnog: dual specificity phosphatase(COG2453)
• Kegg: Link to kegg annotations (AT3G55270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461960.1)
• Pfam: Dual specificity phosphatase, catalytic domain (PF00782.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;