| Id Trinity | FTRINITY_DN56335_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_218859 |
| Sequence | GTTATAAGGAAACTCCTTCTCTCTCTACAGCTATGGTCTAAACTAAACCAAAACACTCTTTTTCTTCACCAAAAGTACTTTATTTGTTATTTTCTTCTTT GCCCTCAACCTTCTAACACCTCTTTGTTTTTTCTACTACAAATCATCCATTACTGTGTTTCTATAAGCTGAAAATTCTTATTAACTTGATTTTTCTTCCT AGTTCTTACCCTTTAAACATTTCATATTTATATATTTACATGTACCATAGAATGAGTGAGAGAAACAAGAGTCAAGGGTCTTAGGTGAAGAAAGAATGGT AGATGTAATATAATACATACCATACTTGTTGTTTCCTTCCTCTTTCTCATATTAATCTTGTTAGATAGAGTTTGGAGTTTGGAACATATTTTTTGGGTGG GTTTTGATTAAAGTTTCTATCTTTATCATTTCCCTAGCTGGTTACTTTTGTTGTATTTGTGTTGTTTTTGTGAATTGTGAAATATGGTAGGTGAAGAAGA GGGTAAGGACTCTGCCGGTGGTGGTCACCGGAGAACATATTCCCGGTCAGTTTCATGGACTGATCGAGTTCTGTCGAGCGGAAAGCCGCATAACAAGCCA AGGTCGTTGCTGCCATCACTTCAGCCTTTATCAATTAACAAAAGCAGTGTTCAGGAATGGCCAAGTGCTGGATCTGATGACCTTGGAGTTTGGCCACTTC CTCAGACTCCAAGAGGGTCAATAAGATCCACTGAATTGGGTTCTATGAATGAGTTTCAGTTCAAGAGAGATAAACTTGCATTCTATGACAAAGAGTGTTC TAGAATTGCTGACCATGTGTACCTTGGAAGTGACACAGTTGCAAAGAATCATGAGCTTTTGAGGCAGAATGGGATCACTCATGTTCTTAACTGTGTTGGT TTTGTTTGCCCTGAATATTTCAAGAGTGATTTTGTGTATAAAACTCTTTGGTTGAAGGATAGTCCTACTGAGGACATTACTAGTATTCTGTATGATGTTT TTGATTACTTTGAGGATGTTAGGGAGCAAGGTGGGCGTGTCCTTGTTCATTGCTGCCGAGGTGTTTCGAGATCAACGTCGTTGGTGATTGCATATATCAT GTGGAGGGAGAGTCAGAGCTTTGAAGATGCTTTTCAGTATGTGAAGAATGCAAGAGGTGTCACCAATCCAAACATGGGTTTTGCTTGTCAATTGCTTCAG TGTCAGAAAAGGGTACATGCTATGCCTGCTAGTCCTAATTCTATTCTTAGGATGTATAGAGTTGCTCCTCATTCACCTTATGATCCTCTTCACTTGGTCC CTAAGATGGTTAACCAGCCATGTTCCCAAGCACTTGATTCTCGGGGCGCTTTTATTGTCCATGTTCCTTCTGCTATATATGTTTGGACTGGTAAGAATTG TAACTGTGTTATGTCTTGTAATGCAAAATCGGCAGCTGATCAGGTTATACGTTATGAGAGGGCGAAAGGTCCAGTTATTATGATCCATGAGGATGAGGAG CCACCAGATTTTTGGATTGCTCTTTCCAATGAGCAATTATTAACAGGTACTTGTGATAAGGCAGAGGTCGAGAAGGATGCAGCATTGGCTTCTTCTGAAA GAATGGAGATTGATGATGCAAATGATAAACGGATTCGTCCAAGGAAAGTCACTGACTATGATTTAGATTTTGAGATTTTTCACAAGGCACTTGCTGGTGG TGTTGTTCCACCTTTTTCTGTGTCTAATGCTGAATCAGAAACTTGCCTTCCCGCTAGAGAACACGGTTGGGGGAGATTGAGGAGGAAGCTTGCTAGCGGT CTCATGAAAGGACTGTTCACAACCTGCAAAAACACAACCTCGTCCAAAGATGAATCGTCTGTTATCATGGAAGAAGAAGAAAAACAACACTCTATTGTTG ATCTTTCATCACCATCATCAAACCATCCTTGTGGTTCACCGGATTCATTTGAATGTTTTCCGGATAACAGCTCAGACAGGGCAAAAGATACACTTGAAGT ATTGGACCACTTTGTTCCTAGTGTTGATTCATCCCTGCCACCATCTCCTGGAGGAATGTCGGATTCCTTTGCTTGTTTCCTAAGCAACAGCCCAAAACTC AGTTCCAAGTCACCAACGCTTTCACCTTCAAGTTCTGATTATGCCAGTTCATTTACATTTTCACCTTCATCAACAAACTGGTCTTCTCGTCTGCCATCAC CTTCTAGCCTGGAATCAACTGAAGCCTTTTATGGCAAAGATGCATCTTTCTCAGATGGTTTCTTTTCACTTCAGAAAGAAGCCATCTCTTCACCTTCGGG GGCATTTTCAGCTAATCACACATTTGAAGGAGCAAACTTCTATTTTCCGAGCAAAGGATCTTCGCCTTCCATTGCAGAGCGCCGAGGGAGTAATCTGCCA CCTCGCATGGTGCTACCATCCGTCAATGAATCACCCCGTGCCCACAAGGTCTTGGTAAGATCACAGTCATTCTCTTTGCCTGACTTGGATGATAATTTGA ATAATGATGTTAGTTTCAAACAATCTGACCAAGACGGTGGAAAATGGCTAAAGACAGATGCTGATATTATTCCTATAGCTGTTGAAAATGAGAGCAATGA CATAGGATCATTGTAGGATACTGTGGTGTCATGTAATATGATGATCATGCTTAAAGTAAAAGAGATTAAGAGAAACTTGACACGATGACAATAGTTCAGT TTCTTCCTTTATAGCCTATGGTTGGGACCAAAATGATCTATTTTTGGAGGTGAATTTGCATAAGGTAGTCTGAATATTGCTGCATGTCTGCAAGGTGTAC AATAGGCTGAGTAATAACTACACATAATAACATGCAGGCCTGTGCACTAATAGCATCTTCAGTACATAACAATGATTAAACTTTAGTGAATATAAAGACT ATTTCTCTTTTCTCTTGTTTTTTTCTTGTTCTTGTTCATTGAAGCCATCAGGACAGTGTGAAAGTTGCTATTGTTTTTGCATGAAAACCTATCAAATTGG TGCAAAATGGCTACCTTCGTAGGAAATCACAAAGGAGATATCATAGGATAGCTGACATTAACTTTGTTAGTAATGTTTCCATCATCTTTTACTAGTATAT ACTGTTTCCATTAATAAATTAAAATGATGTTTCAGTCTTTCATAAGCAACATTTCATTGCCAGAAGGTTTCTTCTGCTTACACGGTTTATATGAATAAAA TCAGCTAAATTTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59269; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_218859
| Blastp | Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 50.49% of identity |
|---|---|
| Blastx | Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 51.2% of identity |
| Eggnog | dual specificity phosphatase(COG2453) |
| Kegg | Link to kegg annotations (AT3G55270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464013.1) |
| Pfam | Dual specificity phosphatase, catalytic domain (PF00782.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |