| Id Trinity | FTRINITY_DN56340_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_218353 |
| Sequence | AATTCCTAACATTTTATATATATTAAAATCATAAACTCATTAGCCATATCTATCTCTAACAACAGAAACATTTCATGATGTTCAAACTTGCATGCTTTTT TTCTTCTTTGTTTATATTATTCACTAATTCCTCTAGCAGCAACAACGTTTCATCCTCAATAACTTGTCCCATTTACCATTGCACCAATGGACCTAACATC ACTTACCCTTTCTGGTTATCCCAAGGTACCCCTCCTGACCAATACTGTGGTTACCCTGAATTTGGTCTTATATGTTCAGAACATGGTTACCCTATTTTCT CACCACCACCAGGATTATACTACTATTTGAAAGATATAGATTATATAGGCCAAAGTATTAAGCTAGTTGACGTTGATACTGCAAACCAAACATGTCCAAG AGCACATCACAGTGTTCCCTTAGGAAACCTACCACTTTCTCATTCTCATTTGAACTTGAACCTTAGCTTTCATTATAACTGCAGTGATTACCCTTCTGGG GAACCATTTGTGAAGTGTCTTAGTTCTGGTTTGAAGGAGTCTTTTGTATTTGTGTTGGGGGATGAACCTCAGAGTTTTGACTGGTCAAAGAGTTGTAAGG AAAATGTTGTGGTGGCAGTGTTGAGGGATGAGATTACACTAGATGACAACTTGGTCAATGAGTTTTCTGGGGCTATGAATGAAGGGTTTGTGCTTAATTG GCACACTTCTGCCAGTTGTGCTGATTGTGAGGCTAGTGATGGACTTTGTGGATACAATAACAATAGGACTGAGTTGTTGTGCTTTTGCAAGGATGGAAGT GTAAGAAGCAATAAATGTGAAGAACTAAAGGTACGGTTCCAACAATGGTATTAGGAGCATCAAGATCTAGGATTTTGGAGGTGCTTGTCAAGGTGAAAGG AGCTTCAAGTAGAGGAGATTTGGTGAAGATCAGCAAGATAATAGGTGAAGTGAAAATTGCAAGGAGGAGATGTCATCCTCACATGGGTTCTCAATGAATC TTCTAATTTTTTATGGGAAGAACTATGATCATTGGAACATTCAAATGAAGGCAATATTTGGGTTCAAAGAATGTCTTGATGTTGTGCAACTTGGATTGCA AACAATAGAGGAGAACACTACTGAATATAGGGAAGCCAAAAAGAGAGATTGCAAGGCAATCTTCTTGATTCATGAATGTGTAGACAGTTCCAACTTTGAG AAGATTTCTGTAGCTTCTTGCTCCAAGGAAGCATGAGAAATCTTGGAGAAAAGTTACTCTAGTGGAGTGAAGGTGAAGAAGGTGAGACTCCAAACACTTA GGAGACAATATGAGTTGCTACAAATGGAGGAACACAAAACAATTGCAGATTACCTTACAAGGATTTGTGGCTTGGTCAATCTAATGAAGGGGTGTGGAGA AAATCTGTCTGAGCAAGGTGTAATGAAGAAGATACTCAAAACACTCACTCCCAAATTTGATCATATTATAGTAGCAATAGAGGAGTCAAAGGATCTTGAA AACTTCAAGATTGATGAACTGCAAGGATCCTTGGAGGCACATGAACAAAGGTTCATAGAAAGGTTGGTTGATAGGCAAAAAGTTGTGAGTGCTCAATTCA GACAGAAGAATTCCGATCACTTTGACAAGCACAAAAGAGATAAGAGTAAATGGCATGGTGATAGGAGAAGTGACGTTGCAAACTCAAAATCATGTGGACA AGGATTTCAAAAGTCTAACTCTAGCCATCATAACCATGATTCTGAGATAAGCATAACCAAGAAAGGGAGCAATCAATAGAGTGAAACAAAGAAGAGGGAG AAAAGTAAGATTCAGTGTTTCAATTTCAGGAATTGAGAACATTTTGCAACAGAATGCAAGATCAAAAGGGCCACCAATGTGAAAGAAGCAGAGGCCAGAT TGGCTAAAGATGAAGAGGTACTACTATTAGCAAGAAGAGAAATTTCATGCCTTAATTTTACTGATTCAAAGGAGGACTCAGATGAAGAATTGTTGATGGT GACAACCCAAGATGATCAAAAGTCAGATAGCTGGTATATTGACATAGAGTGTTCCAACCATATGACTCGCCATAAAGAGTGGTTTGTGACCTCAGAAAAC TCTGTGGAGACAAAGATCAAATTTGCAGATGATAGTTTCATCACTACAAAAGGAATTGGAAAAGTGATAATCAAGAAGAAGGGTGACTCAATCTTATACA TCTCAAGTGTTCTATATGTACCAAGAATGAAGAGTAATCTTCTAAGTCTTGGTCAATTACTTGAGAAACATGAGATTATAGGACACGATGCTCAAGATAT TCAACAAGAAAGGATTGTTGATCTTGAAGGCTCCATTATATTAAAATAGAAGCTTCAAGATTGGTATTTAACCTGTAGATCATAAATGCTTGGAATCAAT TGTAGATGACACATGGATTTATTATCAAAGGCTTGGTCACCTCACCTTCAAGAGTCTAGAACTGTTAAGCAAGGATGAAATGGTAACTGGACTGTCTAGC ATCAAAACTCCAATTGAGGTATGCGTTGAGTGTCTCACAAGTAAGCAAGCAAGAAACTCATTATGCTCACAAATACCAACAAAGTCCACCAGACTACTTG AAGTTGTGTACACTGATATGTATGGTCTCTTGGAAGTTCAATCACTTGGAGGGAACACCTACTTTGTAACCTTCAATGATGACTTCACAAGGAAACTGTG GATCTATTAGATAAAGAAGAAAAGTGAAGTATTTGATAAGTTTAAGAGTTTCAAGACCCTTGTTGAAAGGCAGTGTGGCAACAAACTGAAATTGTTAAGG AGTGATGGTGGTGGAGAGTATGTATCTCATGAATTCCATGACTTCTGTGATAGAGAAGGAATAATACATGAGATAATTGTATCAATTACTCCTCAACACA ATGGAACAACAGAAAGAGTCATTAGAAGCATTCTAAGCATGGCAATGAGTATGCTGAAAACAAAGTAGCTTCTAAATTTTTTTGGGAAGGCTGTGGCTGC TACAACATACATAATGAATAGATGCTCTAGAAAGAGGTTGAAGAATGTGACACCTGGAGAAGCTTGGTCATGACTCAAGCAGTGAAAAAAAGTTGTTGGA CAGAAACAATAAAGGAGGAAATTAGATCAATTGAGAAGAACGACACATGGGAGCTTACAACATTACCAAAGGGTAAGAAGGCCATCTTAGTAAAAATGGG TGTATAAGGTGAAGCTCAAGCCTGATGGAACTGTGTCTAAATACAAGGCCATGTTGGTGGCCAAAGGGTTTTGCAAAGATCAGAATTAGATTTTGATGAG GTTTTTGCTCTAGTGGCAAGAATGGAGATAATAAGACTTGTCACTGCAATTGTTATCTCAGAGGATCGATCTTTATGTCAAATGGATGTGAAACAAGATT TTATGAATGGTCCATTAGATAAGGAAGTGTTTGTATCACAACTTCCAGGCTTTGAAGTACCAAACCAAGATAATAAGATGTATAAATTGCATAAAACACT GTATGGATTGAAACAATAATAATATGCTTATTATATGTAGATGATTTGCTTATAACTTGGCAGAAAGGATGATAAAATAGAATGATTCAAAGCAAAGTTG AAACTTGAGTTTGAAATGTCAGACTTGGGAAATCTCTCATATTTCCTAGGAATTGAATTTGCTAGGACTAATGAAGTCATCCTGATGCACCAAAGAAAGT ACATAGCTGATGTACTTGAGAGGTTCAATATGCTTGAGTGCAACTCAGCTTCAACTCCAATTGAAACTGGTCACACTCTAAGCAAGGAGAACTCTTAGAA TTCATAGGCTAAAGCAGTTGATCCAACACTCTGTAGACAAATGATAGGATCATTTAGATACATCTGTAACACAAGGCCTGATCTAGCTTATAGTGTTGAA CTGATAAGTAGATATATGCAGAATTCTAAGCACTCACATGTTGGCAGTGAAAAAGATACTCAAATGCCTCAAAGGAAGCATGGATTTTGAAGTACTATTC CTACCAAAAAAAGCAAAGAACTCAGTGAAGAACTCAACACAATTCATGGCTACACAAATGCTAAGAGCACAAGTGGATACCTATTCAAGCTTGACAATGC CGATGTGAGTTGGTGCTCTAAGAAGCAAAAGGTTGTTGAGGATGATAGAAATAGGACAAGTGAATACCTATTCAAGCTTGGTAATGCAATTGTGAGTTAG TGCTCTAAGAAGCAAAATGTTATTGCTCTATCATCATGTGAAGCAGAATACATTGCAGCTTGCTTGGGAGGATAACAGGCATTATGGCCGCAAGCTCAGT TTATGGAGTTGGGAATGCAGATGGATGAACCAATCCTGTTGTTTGTAGACAACAAGTCAACCATCAATTTAGTAAAGAATTCAACGTCTCATAGTAGAAG CAAACTCATAGAAACCAAGTATCATTTCTTGAGAGATCAAGTGGAGAAGAAACTTGAAGCTAGAATTTTGCTAGACTCAAGAACAACAAGCTCACATACT CACCAAACCATTAAAAATAGATGATTTTCAAAGACAGAGAAGACAACTTGGTGTGATAAGCTTAGCTAGTATGAATTAAGGGAGAGTGTCGAGTAAAGTG TAATTCATATAGCTAGACTCATTATCGATTAACGGTGTGCTTAATCAATTAACAAATCTTATTGTTAGTTATAGTATAGTTAGTTTACTTGCTATAAAAA GAAGGCATTGTATTTAAAAATCAGTTGTTGAATAACAAGTCTGAGTCCATTCATTTTTCTTTTTCTGCATTCATTCTGTCTCCATTCCCTTCGTTTACTT TCTTCATTCACCATCCAATTCTTTCATTACACACGAAATTCAGAACCAAAGTCCAAAGGTTCCAATAACTTATGGATGAGCTTTATTTGCAAGATTGTAT TAAAAGTCATCCATGAAAGTTTTAACCCCACTTTTCACCTCATATGAAACTAACCCTTACAGATTTAACTCGTGATATGTTTGATTATATTTAGTCAAAG CATACAATATTCTTGATACTTGATGAATCTCTCATCATAAATTATTTCTACTTTTTTACTTGTGTCAGTGTGTGTATGTTTTATTAATTGATTATGCTCT GTTTCCATGGCAGGGGGAAGCAACACCAGTTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59308; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_218353
| Blastp | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 from Arabidopsis with 33.33% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 42.47% of identity |
| Eggnog | Serine Threonine protein kinase(COG0515) |
| Kegg | Link to kegg annotations (AT1G18390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451834.1) |
| Pfam | Wall-associated receptor kinase C-terminal (PF14380.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |