Ll_transcript_218061

• Id Trinity: FTRINITY_DN56349_c4_g5_i1
• Name Transcript: Ll_transcript_218061
• Sequence: ACTTCATCAAGACCTCAACATTCCCTTGCTGATCTTCTCTGCTTTCTAAGATTTCTTCTGGTGTGACTATAAGTTCCATTTCTTCACTGAGCATAGGGGG TAGAGACTGTGGCTGTTGATGAGGCTTAAGTGCTTTTTTCAACAAGGAAACATGAAACGTAGGATGAACTTGAGAGTGGGCAGATAGCTCCAGCTGATAA GCGATAGGTCCCACCTTCTTTTGCACCTGAAATGGTCCATAGTATCTAGGAGATAGTTTAGCATGAGGTCTGTTGGCCAAGGACCTCATCTTATAGGGTT GCAACTTAAGGAACACCCAATCACCAACTTGAAATTCCAACTCCCTCCTATGTTTATCTGCCTGCTGTTTCATGAGATTTTGTGCCTTAGATAAGTTGTC ATTTAATTCATCCAGAATTCTATCCCTCTATTCAAACAGTTGGTTGACCTCTTCAACCTTGGACGGCACAGCCCCAACTTTTAGTAATGTGGGGGGATCT CTCCCATACAAGGCCTTGAAGGGAGTCATTCCCGTAGATGTATGGTGGTTTGAATTGAACCAGAACTCTGCCCAGTGTAACCAATCTAACCAAGATCTGG GTTTTGGGCCTACAAAGCATCGGAGATATGTTTCAAGACATCTATTGGTGACCTCTGTTTGACCATCTGTTTGGGGATGGTATGAGGTGCTCATCTTCAA ATGTGTACCAGCCATCTTAAACAAAGCCTTCCAGAACTGGCTCAAAAACAGAGGGTCCCTGTCTGAGACTATGCTACTTGGAAAACCATGCAGCTTCACA ACTTCCTTCATGAACACAGTGGCCACATCCTTAGCAGAATAGGGGTGTCCTAGGGCAAAGAAGTGGGTGTATTCGGTGAGTCTATCTACTACAACATAAA TAGTATCTTTTCCCTTGACCTTTGGCAGCCCACCTATGAAGTCCATAGAGATATCCATCCAGACTTGCTTAGGAATGGGCAGAGGTTGGAGCAGCCCTGC TGGTGCCAATGTTGAATACTTATTTCTCTGGCAGATTTCACACCCTTCTACATATGCCTTAATATCAGATTTCATTCCTTCCCAAAAAAAAAACTAGCAA TCCTCTTGAATGTTTTAAAGTGCCCTGAGTGACCTCCCATAGGAGTCTCATGGCATTCAGCCATGATATAGGGAATTCTATTTGAGGATTTAGGAAGAAC TAACCTGTCCTTCTAATACAAAATCCCCTTCTTGAGTGCAAAATCAGGATGAGATTTTGGGGATATTACCAAGTCTTGCATCACCTTTTTCCAAGTAGAA TCTAGCTGCAACTCTTGAGTCCAAGTCTCCAATTCATCATTAGTTATCAGTGATAGGGCAGAGTACATTTTCTGCCTAGACAAAGCATCTGCAACTGAGT TATCTCTGCCAGGCTTATACTGAATCTCGAAATCTAGCCCAATCAACTTCACGGCCCACTTAAATTGCTCTTCTGAAAACAATCTTTGCCCAGTAAGGAA CTTAAGGCTTTTCTGGTCTGTCCTTATGATGAAATGCCTACCCATTAAGTAGTGTCTCCACTTGTGGATGGCCTGCACTAGAGCCATAAGCTCCCTTTCA TATACTGATTTCTGTTGAGCCCTAATAGATAGTCCTTGACTCCAAAATGCCAATGGTCTGCCTTCTTGCATGAGGACTGCACCTAATCCCTTGCTTGAGG CATCAGTCTCCACTACAAACTCCTTAGTAAAGTCAGGGACAGCGAGCATGGGGAGTTCCATCATACTAGTTTTAACTCTTCAAATGCTGCAGTGGCCTCT TCATCCCAATGGAAGGCATCTTTTTTGAGTAAATTGGTAAGTGGCTTAGCTATCTTGCCATAGCCTCTTACAAATTTCCTATAGTAGCCTGTCAACCCGA GGAAACCCCTCAATCCTTTTATGTTCACTGGTCTAGGCCAAGACTTGATGGACTCTACCTTGGCATCATCAGCAGCCACCCCCTTCTCTGAGATCACATG ACCTAAGTACTCAATACTAGGTTGGCCAAAGCTACACTTCTTCAAATTGGCCTTTAGAGAGTGTGTTGATAGCAACTTCAGAACTGTTTGTAGATGATGT GCATGAGTGGTTAGGTCAGGGCTATAGACTAGAATGTCATCAAAGAAGACTAATGTGAATTTTCTCAGATAGGGTTTCAAGATCTCATTCATCAATGATT GGAAGGTAGAAGGGGCATTTGTTAACCCAAAGGGCATCACTAGAAATTCATAGTGTCCCTCATGGGTTCTAAAGGCAGTCTTGTCCACATCTTCTTCTCT CATTCTAATTTGGTAATACCCTGATTTGAGGTCTAGCTTGGAAAAGACTCTAGCACCACCCAATTCATCCAGCAACTCTTCAACTAATGGGATTGGGAAC TTATTGGGAATGGTGATCTTGTTAAGGGCTCTATAATCTACACAAAATCGCCATCCCCCATCCTTCCTTCTAACTAGGATGATAGAGCTAGAATAGGGAC TGATGCTAGGTCTAATGACACCAGCATCTAGCATCTCAGAGACTAACCTTTCCACCTCTGTTTTTTGGTAATGGGGACATTTGTAAGGTCTAATGTGGGG AATATCAGACCCTGCTTTTAAATGGATGGCATGATCATGTTCTCTGGATGGAGGTAAACCTTGAGGATCTTGGAACACCTCTGTGAATTCTTGCAAAACC TCTCTGATCAATGTAGGTATTTCTGATTCTGCTTCCTTCTTCTGATCATCACAATGGACTATCAATCCTTCACTCTCTTCAAGCAAGACTTGCATAAATG CTTTCAATGACAATTCTGCTCTAGCCAGTGTTGGATCACCCATCAGTGTGATGGTGGAATTTCCCTGTTTCACCTTCAATCTCATCTTCCCAAAGTCTGC CATCACCTCTCCTAGACTAGCTAGCCACTCCAGCCCCAAAACAATATCCACTCCCTTCAATCCAAATAGGTAGAAGTCTTGTACTATTTCTAGATCTTAG CATGTAAATTCTGAGTTGAGAGCACTTACCCTTGCCCTTGATATGATGTCCATCACCCACTTCTACCACATAAGATTTAGTTTCATCAATAGGTAACTGC AGTTTCTCTACCAATTTCTTGGAGATGAAGTTATGTGAGGCTCCACAATCCAGCATCACAACAATAGGTTGCAGACCAATTAATCCAGCTATCTTCCACG ATTTAGCAGTGGTGAGTCCCTTCATGGAGTATAGGGATAGTTGCAAGGAATGAAACCCTTCTACTTCAACCTCTTGCTCCTCATCCAACTCTTCCCCTTC AGCTAGGATCAACATTCTGAACTGTTTGTTTTTGCACACATGTTCTCTGGAAAATGGCTCATCACACCTAAAACAGAGTCCTTTTTCTCTTTTTTCTCTC ATCACACCTAAAACAGAG
• Tissue: flowers
• Gene name: LI_gene_59411;
• Additional information: details;

Expression of Ll_transcript_218061

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0
• LF2: 0.2
• LF3: 0.2
• LF4: 0.1
• UF1: 0.1
• UF2: 0.1
• UF3: 0.2
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_218061

• Blastp: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 44.41% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 44.41% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416449.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;