| Id Trinity | FTRINITY_DN56352_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_220176 |
| Sequence | GATTCCGTTGCCGAACCTATAGAGATGATGTTATTTATCATGCTACCCAGGATCAACAGGGCCTGTTAGTTTTTCTCCTTAATAAAATTCACATATAACA TATTCTAATCAATTACTGCTTCTTATTAATTATTTAATCGCTTTCGAATGTTGACTATTTAATCAATGTTTGGAATTACTGGTATACGTTTTTTTCCCAT CTCAGTATTTGACCATTGTTTGATTTTGTGAAGTTGTAATCTGTTCGGGTTTTTTATTTTTTATTTTTATTTCTATAATGTTGATCATCTTTGTTATCTT TTAGGTCTAAAATTTACACGTTTCATTGATTTTTGGAGGCTTCAATTTAATTTAAGATCAAAAGAGACTCATTAGTTTTGGTGCTACTGATATTCAGCTA GAAGTGACTCTGGAAAATACATATAGTGTTGGTTAATTCTAAAACTTTTGTTTGTTTGATTGCCCAGAGCTTAGGTTTCAGTTCTTGTAGTTCAATTAAG GGTCCAATATTTGTTGAGCCTCTATGATATAGTTCAATGAAGGGTCCAAACCATGGTGTGATATCGCAGTTATACGTAATGGTGTTATGGTTTGCCCTAT TATTTTTATACTTCCTACATTTAGTTTCTTAACGTCTCTTTAGATTTTTGTTCCTTTTTATCTGCGGTTTTCGAATATTGACAAGGCATTAATTATTTCT TTCTATCTTTGTTCGCTGCATTAATAATTTAGTCAAAATAATAATTAGTAATAAGAATATTTGCAGTATTTTGGTAAATGCTATTTCAGCCAAATAAAAT TATTTATACTTGTAATTGAATCTATTTAATATTTTCCTTAATTTTTGTGCAAACTACCTTAAAATATACATAGATAAGAAAGAATGGATTACCGCTAAAA GACCTTATGTCTGCTACCTATCTTTTTCCGGATCATGCACTTGAGGTTGACCTGATGCTTCATTTGTGTCTCAGGATACCTTGGAATGGAAAACAGGATA TTTTGATTGACAGATTTGATGGGCGTGCTCTCCTTGATTTCATTCGGGAATCTGGACACAGGCGTGTCCAGGAAAAGACTGAAGAAGAAGAAGAATTAGA GGAGTTTGTTAATTTTGAGCGTTATCGGGATTTAGTAAAGCATCGGCGTAGAGGATTTACTGACGAGGAGGCTTTGCACCATGTCAATCAAGAGATGGAG GCCAAGGCTGCTGCTCCATTTGCATCAGACAAATCTAATTTGTCACAGCCTGCTGCAAGCAAAGGATCGTACTCGCAGGTTGGGTTTTCTTATGATGGGA ATGGAAAGGAGGAATCCCAGTTTTCGGATGACGATGATAACGAGGAAGATGAAGATGAAGAGGATGATGAGGATTTTAACAGTGATGATAGCAATGATGA AGGGATGGAAATAATAGCGAAAGAATATGGAGTTAAAAGGTATGGTTGGCTTGTTTACATGGATAAGAAAGCCAAGGAGGAAGAAAAAAGGCAAAAGGAG GTCATCAAAGGTGATCCTGCAATTAGGAAGCTGAGTCGTAAGGAAAGAAGGAAGGCTTCTCAGATTGAAAGGGAGAGAGATAGAGATGCTACACGGATGT GTGGTACTCGTGTGCTACATCATGATCCCTACCGGGAATCAAGACAGAGCCCTACATATGAAGCTTATTCTCGTTCTAGAAGGTCAAGGTCCAGATCACG GTCCTACTCTCCTTTATACTCAAGGCGCTCTTCTCGTAGTAGTCGAGGTGGTCACTCCGATGATCTTCACCGAAGCAAAGCGAGGACCTCTAAAATAGAA TACATCACTGAATTTGGGGGCTCTGGAGATGCAGACGATTCCAAGCGTCAAGGATTTTCTCCACCACGATCTCCTCCGTCCCAACTTGATACATTAAACC GGTCGGAGCACTGGACCTTTAATTCTTGCCAAGATAGATTGGACTTTTCTCTGCTGCAGCATATCACACATTTTGCTGCCTGAGACAATTTTTTGTGCTT TAGAATAGATCAGGGCTAGGATTGTCAGGGTAACTTCCAAGTGGACATAGGGGGAGGCTTCCTATTTGAAGCTCAATGTTCCCTGAAATAAATTTTGTAT AACTAACTACCTGTGAGTTGCATGAGAATATTGCACTTGTTTTATCTGACACCTCTGCTTACTTGCAGACCGTCATCTGGTTGCATACTTGAGGCATTGC ATGTGGATCCTGCTTCTGGTGTATCTATTGATAAGGATAAGAGCACTAAAGTGTTGAAACCATCATTAAGCACATCTTCAGCATTAGCAAAATTGAAGGC AAGTGGCTCTGGAGGCCCCTTAAAACTTCCACCAGGGGAGAAGAAAGAAACTCCTCAAGAAAGACTTAAAAGGATCATGAACAAACAACTCAACAAACAA ATACAAAAGGACACTGCTGCAGAAATAGCTAAGAAAAGGGAGCAGGAGCGGCAAAGGCAGGAAAAGCTTGCTGAAACTAGCCGATCGAGTCGTTATAGGC GCCGGAGCCGCAGCAGGAGTTACAGCCCTTCCCCTCGAAGAAGGTACAGGCATAGTAGAAGTCCACATAGAGGCAGGGGTTCTGGAAGACATTATTCTAG TTCCCGTTCACGCTCTAGGTCCCGCTCCCGTCCGCGCTCTCGGTCCCGCTCCCGTCCGCACTCTAGGTCCCGCTCTCACCCACGCTCTCGATCTCCTTCA TATTCTCGTTCTCCCAGGTCAAGAACCCGTTCAAGGCACTGATTGAACCTGGGTGCAAGTAGAAGAGAAGGATTGAGGGTGGTTTGTGTTTAATCTGTTT ATATATGGATATTACTGCTCCCAAGTGCTTAGGGTAACAATTACTATATATGCTTTTGGTTGAGATGTGGTGTAGCTTGCATTCTTTAAAACTGTCACCA AAGGAGTTAACATATTTTCAATATATTTATGAAGTATTTATTTCTAGAAAATGATGTCAGATGCATCTTGTCTACGAAAATCTGTTTCACTCCTCCCTCT CCCATCAAATTATATAAGGATGTTTGAAGTAGAATTCTTGAAAAGAAAATGAATATTGATGAACTATTAACAGATATTTACCTACCACCATAATACTACG ATAATGTGCATTAACAAACAATTATCAATTTGACTATTTAATTGTAAATTATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_59432; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_220176
| Blastp | CLK4-associating serine/arginine rich protein from Homo with 37.14% of identity |
|---|---|
| Blastx | - |
| Eggnog | Molybdenum cofactor synthesis domain protein(COG0303) |
| Kegg | Link to kegg annotations (11129) |
| CantataDB | Link to cantataDB annotations (CNT0000223) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444693.1) |
| Pfam | Alternative splicing regulator (PF09750.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |