Id Trinity | FTRINITY_DN56356_c0_g1_i22 |
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Name Transcript | Ll_transcript_218515 |
Sequence | TCATAGCATCTTCTGAGAAAGGTCGTTCTCGTCTCCAACAACTTGTGCAGTGGTGTGGAGCAGGGTTTGATGGTCTTGTAGTTTTTGATGAGGTATAATG GGGTCATTGCAGTGTCACAAAGCAAAAAATTTGGTCCCTGAATCTGGTAGCCAGCCAACACGAACTGGAGAAGCAGTGCTTGATATCCAGGATCGACTAC CTGAAGCGCGTGTTGTTTATTGTTCAGCAACTGGTGCATCCGAACCTCGCAATATGGGTTATATGGTTCGACTTGGCCTTTGGGGAGCTGGGACTTCTTT CTCTGAATTCCGTGAATTTTTAGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAACTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGC CGGACGCTTAGCTACAAGGGTGCCGAATTTGAAGTTATTGAAGCACCATTAGAAGATGAAATGATGGACATGTATAAAAAGGCAGCAGAATTTTGGGCTG AATTGCGAGTAGAATTGCTGTCAGCCAGTGCCTTCTTAAATGAGAAACCTAATTCTAGTCAACTATGGCGACTATACTGGGCAAGCCATCAGCGTTTCTT TGGACACATGTGTATGTCTGCTAAAGTCCCTGCTGCTGTGAGACTAACAAAGAAAGCATTAATCGAAGATAAGTGTGTAGTCATTGGTCTTCAGAGTACT GGAGAAGCAAGGACAGAGGAAGCTGTGACAAAATATGGTTCTGAACTTGATGATTTTGTTTCCGGACCTCGAGAATTGCTGCTCAAGTTTGTGGAAGAAA ATTACCCATTACCAGAAAAACCCGAACTTCTCCCAGGAGAGGATGGTGTAAAGGAGCTCCAAAGGAAGAGACACTCGGCCAATCCTGATGTTTCAGTTAA AGGAAGGGTCAGAAAAGTTGCGAAGCTGCAACCTCCTAGTGATGTTGAAAGTGATGAAGAATCTGAAACTGACTCTGCTATTGAATCTACTGACTCTGAT GACGAGTTTCAGATATGTGAAATTTGCACTACTGAGGAGGAAAGGAAAAAATTGCTTAAGTGTTCCTGTTGTGGTAAATTAGTCCATTCAGCATGCTTAA TGCCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAAAAAACAGATGAATATCTTATAGCAAGACAAGCTTACATAGATGA ACTCCAGAAGAGGTATGATGCAGCCTTGGAGCGCAAAACAAAAATATTAGAGATCATTCGTTCTTTGGATCTTCCAAATAATCCTTTGGATGATATTATT GACCAGGTAGGAGGACCTGATAAAGTTTCAGAAATGACAGGAAGGAGAGGCATGCTTGTGAGGGCCACTAATGGGAAGGGTGTAACTTATCAGGCTCGTA ATACAAAGGATGTCACTATGGAAATGGTTAACATGCACGAAAAACAGCTCTTTATGGATGGTAAAAAGTTAGTTGCCATTATCTCTGAAGCTGGATCAGC TGGTGTTTCTTTGCAGGCAGATAGAAGGGCCAAAAATCAGAAAAGAAGGGTTCATTTAACTCTAGAACTACCATGGAGTGCAGACCGAGCAATTCAGCAG TTTGGAAGAACTCACCGATCAAATCAAGCTTCAGCACCAGAATACAGGTTACTCTTTACTAATCTCGGTGGAGAACGACGGTTTGCATCAATTGTTGCTA AGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGATCGCAGGGCTGGACCTTCTTTAAGTGCTTATAATTATGATAGTGCTTATGGAAAGAGGGCTTT GATGATTATGTACAAAGGAATAATGGAGCAGGACTCTCTGCCTGTTGTACCTCCAGGTTGTTTGTCAGACAAACCAGATACTATTCAAGATTTTATTATT CAGGCAAAAGCTGCTCTTGTATCTGTTGGAATAGTTAGGGACACAATTCTTGGTAATGGTAAAGATCTTGGAAGGTTATCTGGTCGTATTATCGATTCTG ATATGCACGATGTTGGACGATTCCTTAACCGGCTTTTGGGACTACCTCCTGAGATTCAGAATAGGCTATTTGAGTTATTTGTAAGTGTCTTGGATCTTCT CGTTCAGAATGCTCGCATTGAAGGTAACCTTGACGCAGGCATAGTTGACTTGAAAGCTAATGTCATTGAACTACAAGGGACTCCCAAGACGGTTCATGTG GATCAAATGACAGGGGCTTCAACGGTTTTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTCAGCAAGCACCATGCTGAATGAAAAACAGAAGG ATGGACTTGGTTCATCCAATGATGGCTTCTATGAGTCCAAGAGAGAGTGGATGGGAAAACGTCATGTCATTTTAGCATTTGAAAGTTCTGATTCAGGCAT GTATAAGATAGTCCGCCCCCCTGTTGGAGAATCAATCCGGGAGATGCCTCTGTCTGAACTAAAAACTAAATATAGAAAAGTTTCATCATTAGAGAAGGCT CAAACTGGTTGGGAAGAGGAATATGAAATTTCATCTAAACAGGTATATTTTGTCAGTACGTTACTTCCTGTATTTTTAATTTTGCAGGTAGTCCCAAATG ATTAAAGTCTTGAAACCTTGTGGTTTGACACAAGAAGTGAAATAGTACTTGTTACTGTCAAGCAGGGTTCCAGTTTTGTTAGGATTAAAAGGATATTTTA TTTATTTGTTTTGCTACAGTCAATGGTTATAAGAAATTTAAAGAATAACATCAAATTGAAAAGGAAGTATGAAATTGTTTAGAGATAATTTCTGAGTTGC TTGAGTGAGTCTTACACTCAGCATAGTAAGCTTTTATATACACTTGTTACTAACTACAGCTTCTGATTACAGGAAAATTACTAAGATATAATTTTCCTAG GTACATGAATGACATTCCATATGTACATGAATCTACTAATTCCTGAACATGAGTTAAAGCTTTTGACTATACGAAAAACCAAATTTCTTCACCCCTTCTA TTTCCCGCTCTTCTAAGTTTAACTGATGTACGACTGTCCAGTGTCCAGTATAAATAGAAGATTGCTTTCTACTGGTTATGATCCTGTTTATAAATTTGAC TTAATATACTCTCTCTTTATGGTGGAGCAGTTTTTTGTGGCTAATGTCTGGGCTAGACATACTCATTACTTGGATGATGTCATAATAAAAGTTCCAATAT CTTTAGTTCAGTGGTTACAATTGATAGTGGCCTTCTTGATTTTTGTAAATAGCAGCTTAATTAATTCTAACAGAACTCCTGCTCTTATGTTTTACAATGC ACGAGCCCACCATATTAGACGGAGTGATTTTGGTAGTCTTTAATGAGAACGGACACCAAAAATTATACTTTGCTATTAATCTTGTACTATTATATTTATA GCAAACCGTTCATTTTTCTGATTGTGTAGAAACAAAATGAAGTCTCATGCTTTCTGGTGTTACAAATCTGTGGCACTAAAATATTTTAATAAATAGATTA TAGAACCATACCTGTCCTCTGATTGGTCGCACTTTAGCATAAAAAATTGTGACTTAAATTTAATGGTTAAAAAATCACTTACTTATATACATTTTAGTGC CATGTACTTAGTAATAGGGTGATTATAATAAAGTTTTGCATTGCTCCCATGCTCTATTGTCTCCGCCATCTAGACCTCATCTATCGGTACATAGATATGT TAGAATGCATCTATGGTAGTACCTAGAAACACACATTTAGGTGTAGGTGAGAAAAATATTTAATACTTGTTGACTTTACACTGTCTTACATTTTGGATTT TTCTTACCTTTGTTGGCAGTGCATGCATGGTCCCAAGTGTAAGATTGGCAACTTCTGCACAGTTGGCAGAAGACTACAGGAAGTAAATGTC BLAST |
Tissue | flowers |
Gene name | LI_gene_59472; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_218515
Blastp | Protein FORGETTER 1 from Arabidopsis with 80% of identity |
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Blastx | Protein FORGETTER 1 from Arabidopsis with 79.44% of identity |
Eggnog | Strawberry notch homolog(ENOG410XQ7Q) |
Kegg | Link to kegg annotations (AT1G79350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432321.1) |
Pfam | P-loop containing NTP hydrolase pore-1 (PF13872.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |