Ll_transcript_217543

• Id Trinity: FTRINITY_DN56358_c5_g1_i1
• Name Transcript: Ll_transcript_217543
• Sequence: CTCCAATAAGTATTGAAAGCGAGAAAATGTGATATAGAGATATAGAAAGGAGTGTTGGTGTGGCTCCAAATTAACCACGAAACTATAACATAATAACAAC AATTTATATTCACTCAATTCATCATCTTCTTCTTCTTCTTCTTCATTCTGCAACACAGTGCATATACCAAAGTGAGGTAAATGATAATGGATATGACTAA ATCCACACCTTTGACGTGGTCCCACACCATCTCTCATTCTCTTCATCTTCCTGCTCCCCTCTTTACCACTCAGGCTAGGAGCTTCAGGGTTTTGTGTGCC TCTCATCAAACCCCGAAGGTAAATAAATCATTCTCCTCCAACTTCTACTGCACATAATTTTATGTTGATTGTACGTAATTGCAGGGGAATCAAATGATCA TATCCATAACTGGAGCAACAGGTTTTATAGGAAGAAGGTTGGTGCAAAGGCTTCATGCAGGTTATCCATTAGTTCAGCCTATAACTCCCTAGGCCCTTTC ACTTTTTGTTTTATGATATGTGCCCTTTTTTTAGTACATTCATATATGGATCCTAAAATCATTGTGTTCTCATGTCCCCAGCCAATCAAATTTGACCAAA TAATAATAAAAAATGTTATTTTATGTTTTTGTAAATTTTCTTTTTAATTATGTCACACTCTTCCGTCGGATTGAGACAGGGTATGAGATAGGTGATCTCT GTCCATTGATATATAGCCTTTTTCTAGCGCTCTCATGTGGATGAGGATCTGTTGTCCCCAATTATGTCTCCAACTATGTACCAAACCAATCACAATGCAG AAAAAATAAATAAAATGATAAATATTTAATTTTGTAACTGATGTGACATGTTGTTATTGGCTTGGGACAGAGTTCGGGGTTCGGGACAGCAGATCCTTGT CCCCCTCATGTATCTCTAGATTTCAACCTTATTTGTCCAATCCTGGATATCCTGTACTATCAAGGTGCATTCTGGTTGTATTGTCCTCTTATGTTGCAAA ATAATTACAAAATATAATTTTGAAGCCTCTTGTGTCAAATAACTGATAAATGGTTGTGTCCTTATGTCATTGCCCTGCATAGTGAATCTGTAGAATCACT GAATTTTGTTAGATCTCTTGCATTCCTCTCTGTATCATTTAAACTCTTTGCTTTTGCTGGTGTAACATTCTCTTCTTAACTAACAATGTTTTGCAGACAA TCATAGTGTTCATGTCTTGACCCGTTCTAAATCTAAAGCACAAGAAATCTTTCCGGGTAAGAAGGTAATATATTACAGTAATAATTTGCATTAGTACTCA CAGTTAGTAAAAACATATACTGACTACAACTCGTTATCAACTGCAAACTTTTTCCAAAGAACAAAATGACATATCTACTTCACTGAATAAGGGCAAAGCA CCTTAAGAATCATATTTGTCATTGTTGGTTTTAATTCATAAATAATCTGGATTCCTCTGCTAATTATTTTTTACCTTTATCTTCTTTGTAGTAGTGGAAA AACTAATAGTTTTCTGTACAACCGGAGTCAAACTCAGATATATACTATACTTCGGATTAACTGGTTAACTCTGCCTTGGTATTTCCAGTGAAAGACTTTC CAGGAATCAAGATTGCAGGGGAGCCAGAATGGAAAGATAGCATTCAGGGCTCAACCGGGGTTGTGAATTTGGCTGGATTGCCCATAAGTACCAGATGGTC TTCTGAGGTTATTGCCATGCTTTTATCACATCCATTATCTAAATGAATAAATGATTTAAACTTGAGGTTACATCTAGTGGTGGTTATTTAGAGATAATAG CGTAATAGTCATCTTTCTTTTAATATCTTTTTCCTTGTGTCCGTTAGAACTAATTTGAGGTTTTTCTTTGCTTGTTGTTAGTATAAGTCTTTCTTTTCTA GTATAACCTACTGAACAACATTTCTTAGAGCCTAGTACCGGACAATACATATATAACACCAAAAGCATTACATAGATTTTAATGTTGCAGATAAAGAAGG AAATCAAGGAGAGCAGGATTAGAGTGACCTCAAAGGTAAGCATACATCTCCAACGGATAAAATAATAAAAATATCTTTCTTTTTTCATTTGGCAAAATAT ATCTTTGCGTCAACTTAAGCAAGAGTTATTTACATGAACCATTTCTTATTCTTCCTCTGACCTATTCATTTCATAGCAAAGGTTGTAGAATTGATAAACA GTTCACCAGATGATACTCAACCTAAAGTTTTTGTTAGTGCAACAGCAGTTGGTTATTATGGTATGCTTTTAAGCCTAGAATGGTTCTTTATTGGTTGATC ATCTTCTTGCTTGTTAATTAATGTTGTCATCGATTATTTTCTCCCTTCTTGTGTAATAATACTTATTGTCATTGATTATTACATTCTTCTGCTAGCAAAT GTAGTTATTTTTGTAGCATGTATGATTTTGCATCAAAAGTTTGCTTAACATTTTCATTTGATTTTGCTGTGTTCAGGCAGCAGTGAGACACAAGTTTTTG ATGAACAAAGTCCATCGGGAAAGGATTACTTGGCCGAGGTTTGTAGAGAATGGGAATCAACAGCCCTACGAGTAAATGGTGATGCTAGAGTAGCTCTTAT TCGTATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGCTAAAATGGTACCCCTCTTCATGATGTTTGCTGGTGGTCCTTTAGGCTCTGGAAAACAG TGGTTCTCTTGGATTCATTTGGATGACATTGTCAATTTAATATATGAAGCACTATTAAATCCATCTTACAAAGGAGTTATAAATGGAACGGCCCCAAATC CTGTCCGATTGTCAGAATTATGTGAGCAACTGGGATATGTCTTGGGTCGTCCCTCGTGGCTGCCGGTACCAGACTTCGCGCTCAAAGCTGTCCTTGGAGA AGGTGCTTCTGTGGTCTTAGAAGGGCAGAGAGTGCTTCCTACTCAGGCTAAGAAGTTGGGCTTCCCATTCAAATATTCCTACGTGAAGGATGCCTTAAAA GCAATTCTTTCATGAAGCACTTTTCTTCTTTGGATTATTGCATCAGCTTTTCCCAGACACAAGTGGCATTCACTGTAGACATTTAAAGGTGGTACAGTTA TGGTTAATTATGATAATGTATAAATATATGATTCTCTTCTGGCATGTGCCACTTTACTACTAGGTGATATGCCATCACCCATTTCTTCCTTAACATTGCT AAATTGCCACTTCATTATAGAGGCAGCCATATTTGTTCACAGCAAAACTTTGCATGATTTTATGAGTTCTATTCTAATGACTATAAATATGAAGATTTTT TATATCACTTCACTATAGATGCTAA
• Tissue: flowers
• Gene name: LI_gene_59496;
• Additional information: details;

Expression of Ll_transcript_217543

FPKM

• FPAB: 0.4
• FPNAB: 0.2
• LF1: 0
• LF2: 1.1
• LF3: 0.5
• LF4: 0
• UF1: 0.7
• UF2: 0
• UF3: 2.2
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_217543

• Blastp: Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 81.82% of identity
• Blastx: Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 82.58% of identity
• Eggnog: Epimerase(COG1090)
• Kegg: Link to kegg annotations (AT2G21280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450999.1)
• Pfam: Domain of unknown function (DUF1731) (PF08338.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;